Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4625 |
Symbol | rpmD |
ID | 6966963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4282635 |
End bp | 4282814 |
Gene Length | 180 bp |
Protein Length | 59 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643388330 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_002272758 |
Protein GI | 209397407 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000160254 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA CTATTAAAAT TACTCAAACC CGCAGTGCAA TCGGTCGTCT GCCGAAACAC AAGGCAACGC TGCTTGGCCT GGGTCTGCGT CGTATTGGTC ACACCGTAGA GCGCGAGGAT ACTCCTGCTA TTCGCGGTAT GATCAACGCG GTTTCCTTCA TGGTTAAAGT TGAGGAGTAA
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Protein sequence | MAKTIKITQT RSAIGRLPKH KATLLGLGLR RIGHTVERED TPAIRGMINA VSFMVKVEE
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