| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4616 |
|---|
| Symbol | rplQ |
|---|
| ID | 6971085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4277708 |
|---|
| End bp | 4278091 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643388322 |
|---|
| Product | 50S ribosomal protein L17 |
|---|
| Protein accession | YP_002272750 |
|---|
| Protein GI | 209399907 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0203] Ribosomal protein L17 |
|---|
| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00563678 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAACTG AACCGCAACA GCAGCCATCG CCAGGCTATG
TTCCGCAATA TGGCAGGTTC ACTGGTTCGT CATGAAATCA TCAAGACGAC TCTGCCTAAA
GCGAAAGAGC TGCGCCGCGT AGTTGAGCCG CTGATTACTC TTGCCAAGAC TGATAGCGTT
GCTAATCGTC GTCTGGCATT CGCCCGTACT CGTGATAACG AGATCGTGGC AAAACTGTTT
AACGAACTGG GCCCGCGTTT CGCGAGCCGT GCCGGTGGTT ACACTCGTAT TCTGAAGTGT
GGCTTCCGTG CAGGCGACAA CGCGCCGATG GCTTACATCG AGCTGGTTGA TCGTTCAGAG
AAAGCAGAAG CTGCTGCAGA GTAA
|
|---|
| Protein sequence | MRHRKSGRQL NRNSSHRQAM FRNMAGSLVR HEIIKTTLPK AKELRRVVEP LITLAKTDSV
ANRRLAFART RDNEIVAKLF NELGPRFASR AGGYTRILKC GFRAGDNAPM AYIELVDRSE
KAEAAAE
|
|---|
| |