Gene ECH74115_4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4610 
Symbolfmt 
ID6971559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4272306 
End bp4273253 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content53% 
IMG OID643388316 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002272744 
Protein GI209397164 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0267184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGAAT CACTACGTAT TATTTTTGCG GGTACACCTG ACTTTGCAGC GCGTCATCTC 
GACGCGCTGT TGTCTTCTGG TCATAACGTC GTTGGCGTGT TCACCCAGCC AGACCGACCG
GCAGGACGCG GTAAAAAACT GATGCCCAGC CCGGTTAAAG TTCTGGCTGA GGAAAAAGGT
CTGCCCGTTT TTCAACCTGT TTCCCTGCGT CCACAAGAAA ACCAGCAACT GGTCGCCGAT
CTACAGGCTG ATGTTATGGT TGTCGTCGCC TATGGCTTAA TTCTGCCTAA AGCAGTGCTG
GAGATGCCGC GTCTTGGCTG TATCAACGTT CATGGTTCAC TGCTGCCACG CTGGCGCGGT
GCTGCACCAA TCCAACGCTC ACTATGGGCG GGTGATGCAG AAACTGGTGT GACCATTATG
CAAATGGATG TTGGTTTAGA CACCGGTGAC ATGCTCTATA AGCTCTCCTG CCCGATTACT
GCAGAAGATA CCAGTGGTAC GCTGTACGAC AAGCTGGCAG AGCTTGGCCC ACAAGGGCTT
ATCACCACGT TGAAACAATT GGCAGACGGC ACGGCGAAAC CAGAAGTTCA GGACGAAACT
CTTGTCACTT ACGCCGAGAA GTTGAGTAAA GAAGAAGCGC GTATTGACTG GTCACTTTCG
GCAGCACAGC TTGAACGCTG CATTCGCGCT TTCAATCCAT GGCCAATGAG CTGGGTGGAA
ATTGAAGGAC AGCCGGTTAA AGTCTGGAAA GCATCGGTCA TTGATACGGC AACCAACGCT
GCACCAGGAA CGATCCTTGA AGCCAACAAA CAAGGCATTC AGGTTGCGAC TGGTGATGGC
ATCCTGAACC TGCTCTCGTT ACAACCTGCG GGTAAGAAAG CGATGAGCGC GCAAGACCTC
CTGAACTCTC GTCGGGAATG GTTTGTTCCG GGCAACCGTC TGGTCTGA
 
Protein sequence
MSESLRIIFA GTPDFAARHL DALLSSGHNV VGVFTQPDRP AGRGKKLMPS PVKVLAEEKG 
LPVFQPVSLR PQENQQLVAD LQADVMVVVA YGLILPKAVL EMPRLGCINV HGSLLPRWRG
AAPIQRSLWA GDAETGVTIM QMDVGLDTGD MLYKLSCPIT AEDTSGTLYD KLAELGPQGL
ITTLKQLADG TAKPEVQDET LVTYAEKLSK EEARIDWSLS AAQLERCIRA FNPWPMSWVE
IEGQPVKVWK ASVIDTATNA APGTILEANK QGIQVATGDG ILNLLSLQPA GKKAMSAQDL
LNSRREWFVP GNRLV