Gene ECH74115_4609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4609 
Symboldef 
ID6966819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4271782 
End bp4272291 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content47% 
IMG OID643388315 
Productpeptide deformylase 
Protein accessionYP_002272743 
Protein GI209400361 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000863065 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTT TGCAAGTGTT ACATATTCCG GACGAGCGGC TTCGCAAAGT TGCTAAACCG 
GTAGAAGAAG TGAATGCAGA AATTCAGCGT ATCGTCGATG ATATGTTCGA GACGATGTAC
GCAGAAGAAG GTATTGGCCT GGCGGCAACC CAGGTTGATA TCCATCAACG TATCATTGTT
ATTGATGTTT CGGAAAACCG TGACGAACGG CTGGTGTTAA TCAATCCGGA GCTTTTAGAA
AAAAGCGGCG AAACAGGCAT TGAAGAAGGT TGCCTGTCGA TCCCTGAACA ACGTGCTTTA
GTGCCACGCG CAGAGAAAGT TAAAATTCGC GCCCTGGACC GCGACGGTAA ACCATTTGAA
CTGGAGGCAG ATGGTCTGTT AGCCATCTGT ATTCAGCATG AGATGGATCA CCTGGTCGGC
AAACTGTTTA TGGATTATCT GTCACCGCTG AAACAACAAC GTATTCGTCA GAAAGTTGAA
AAACTGGATC GTCTGAAAGC CCGGGCTTAA
 
Protein sequence
MSVLQVLHIP DERLRKVAKP VEEVNAEIQR IVDDMFETMY AEEGIGLAAT QVDIHQRIIV 
IDVSENRDER LVLINPELLE KSGETGIEEG CLSIPEQRAL VPRAEKVKIR ALDRDGKPFE
LEADGLLAIC IQHEMDHLVG KLFMDYLSPL KQQRIRQKVE KLDRLKARA