| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4589 |
|---|
| Symbol | |
|---|
| ID | 6969146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4258097 |
|---|
| End bp | 4259185 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643388297 |
|---|
| Product | general L-amino acid transport system permease protein AapM |
|---|
| Protein accession | YP_002272732 |
|---|
| Protein GI | 209398401 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAG TATTGCTGTC TCATCCCTCG CGCCCGGCGA GCCATAACTC AAGCCGCGCG
ATGGTGTGGG TGCGAAAAAA TCTGTTCTCC AGCTGGAGCA ATAGCCTGCT GACTATTGGC
TGCATATGGT TGATGTGGGA ACTGATCCCA CCGTTGCTGA ACTGGGCATT TTTGCAGGCT
AACTGGGTTG GCTCAACGCG TGCCGACTGC ACAAAAGCCG GTGCCTGTTG GGTCTTCATC
CACGAACGAT TTGGTCAGTT TATGTATGGA CTTTACCCAC ACGACCAACG CTGGCGAATT
AACTTGGCAT TACTGATTGG CCTTGTGTCA ATCGCACCAA TGTTCTGGAA AATACTCCCG
CATCGCGGTC GCTATATTGC GGTCTGGGCA GTGATTTACC CACTGATTGT CTGGTGGCTG
ATGTATGGCG GTTTTTTTGC TCTTGAGCGG GTTGAAACCC GGCAATGGGG CGGGCTGACG
CTAACTTTAA TTATTGCATC AGTTGGGATT GCGGGGGCGC TACCGTGGGG GATCTTACTG
GCGTTAGGTC GCCGCTCCCA TATGCCGATT GTGCGCATCT TATCGGTCAT TTTTATCGAA
TTCTGGCGCG GCGTGCCGCT GATTACCGTT CTGTTTATGT CTTCGGTCAT GCTGCCTTTG
TTTATGGCAG AAGGCACCAG TATCGACAAA CTGCTCCGCG CGCTGGTTGG CGTGATCCTG
TTTCAGTCAG CATATGTTGC GGAAGTCGTG CGAGGTGGAT TACAGGCGCT GCCTAAAGGG
CAATATGAAG CGGCAGAGTC GCTGGCGTTG GGTTACTGGA AAACTCAGGG GCTGGTTATT
CTGCCACAGG CGTTGAAGCT GGTAATTCCT GGGCTGGTAA ATACCATCAT CGCACTCTTC
AAAGATACCA GCCTGGTGAT CATTATCGGG TTGTTCGATC TTTTCAGTAG CGTTCAGCAA
GCAACCGTTG ATCCCGCCTG GTTGGGTATG TCGACGGAAG GGTATGTTTT CGCCGCGCTG
ATCTACTGGA TCTTCTGTTT CAGCATGTCG CGCTATAGCC TGAACCGCCC CGGAAATCCT
GGAGACTAA
|
|---|
| Protein sequence | MTKVLLSHPS RPASHNSSRA MVWVRKNLFS SWSNSLLTIG CIWLMWELIP PLLNWAFLQA
NWVGSTRADC TKAGACWVFI HERFGQFMYG LYPHDQRWRI NLALLIGLVS IAPMFWKILP
HRGRYIAVWA VIYPLIVWWL MYGGFFALER VETRQWGGLT LTLIIASVGI AGALPWGILL
ALGRRSHMPI VRILSVIFIE FWRGVPLITV LFMSSVMLPL FMAEGTSIDK LLRALVGVIL
FQSAYVAEVV RGGLQALPKG QYEAAESLAL GYWKTQGLVI LPQALKLVIP GLVNTIIALF
KDTSLVIIIG LFDLFSSVQQ ATVDPAWLGM STEGYVFAAL IYWIFCFSMS RYSLNRPGNP
GD
|
|---|
| |