| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4588 |
|---|
| Symbol | |
|---|
| ID | 6968512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4256906 |
|---|
| End bp | 4258087 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643388296 |
|---|
| Product | amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family |
|---|
| Protein accession | YP_002272731 |
|---|
| Protein GI | 209398125 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCATC GCCGCTCAAC CGTTAAAGGC TCACTCTCTT TTGCCAACCC TACGGTTCGC
GCCTGGTTAT TCCAGATCCT TGCCGTTGTT GCTGTTGTCG GCATTGTTGG TTGGTTATTT
CACAACACTG TAACGAATCT CAATAATCGT GGCATTACTT CAGGTTTTGC CTTTCTGGAT
CGCGGCGCTG GCTTCGGTAT TGTCCAGCAT TTGATCGATT ACCAGCAGGG CGACACCTAC
GGACGCGTTT TTATTGTCGG CTTACTCAAT ACGCTACTGG TTTCTGCATT GTGTATTGTG
TTCGCTTCTG TTTTGGGCTT CTTTATCGGT CTGGCGAGAC TTTCGGATAA CTGGCTGCTA
CGAAAGCTTT CCACAATTTA TATTGAGATC TTCCGTAATA TTCCCCCGCT GCTGCAAATC
TTCTTCTGGT ACTTTGCCGT GTTGCGCAAT TTGCCCGGAC CACGCCAGGC TGTGAGCGCG
TTTGATCTGG CCTTTTTGAG CAATCGTGGG CTTTATATTC CGTCACCGCA GCTGGGAGAC
GGATTTATTG CGTTTATCCT GGCTGTTGTT ATGGCTATAG TCCTTTCTGT TGGGCTATTC
CGCTTTAATA AAACATACCA GATAAAGACC GGACAGCTGC GCCGCACCTG GCCCATCGCC
GCAGTGTTGA TCATCGGTTT GCCTTTACTG GCGCAATGGC TTTTTGGCGC AGCACTACAC
TGGGATGTCC CAGCCCTACA AGGCTTTAAC TTCCGCGGCG GGATGGTTTT AATTCCTGAA
CTGGCAGCCT TAACGCTGGC ACTTTCGGTT TATACCTCTG CATTTATCGC CGAGATTATC
CGCGCGGGGA TCCAGGCAGT GCCTTATGGT CAACATGAAG CGGCTCGGTC ACTGGGATTA
CCCAACCCGG TTACGCTACG CCAGGTCATT ATTCCCCAGG CACTGCGGGT GATTATTCCA
CCGTTAACCA GCCAGTATCT CAACATCGTC AAAAACTCCT CTCTTGCCGC CGCTATTGGC
TATCCCGATA TGGTTTCGCT GTTTGCTGGC ACCGTGCTGA ACCAGACGGG GCAAGCCATC
GAGACGATAG CCATGACCAT GTCGGTCTAT CTGATTATCA GCCTGACTAT CTCGCTGCTG
ATGAATATCT ATAACCGCCG CATCGCGATC GTGGAACGCT AA
|
|---|
| Protein sequence | MSHRRSTVKG SLSFANPTVR AWLFQILAVV AVVGIVGWLF HNTVTNLNNR GITSGFAFLD
RGAGFGIVQH LIDYQQGDTY GRVFIVGLLN TLLVSALCIV FASVLGFFIG LARLSDNWLL
RKLSTIYIEI FRNIPPLLQI FFWYFAVLRN LPGPRQAVSA FDLAFLSNRG LYIPSPQLGD
GFIAFILAVV MAIVLSVGLF RFNKTYQIKT GQLRRTWPIA AVLIIGLPLL AQWLFGAALH
WDVPALQGFN FRGGMVLIPE LAALTLALSV YTSAFIAEII RAGIQAVPYG QHEAARSLGL
PNPVTLRQVI IPQALRVIIP PLTSQYLNIV KNSSLAAAIG YPDMVSLFAG TVLNQTGQAI
ETIAMTMSVY LIISLTISLL MNIYNRRIAI VER
|
|---|
| |