Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4587 |
Symbol | |
ID | 6967702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4255813 |
End bp | 4256838 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643388295 |
Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
Protein accession | YP_002272730 |
Protein GI | 209397538 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TGATGATAGC CACACTGGCT GCCGCCAGCG TGCTGCTTGC CGTTGCAAAT CAGGCGCATG CTGGCGCGAC GCTTGATGCC GTTCAGAAAA AAGGTTTTGT GCAATGCGGG ATCAGTGATG GATTACCTGG GTTCTCTTAT GCCGATGCAG ACGGTAAGTT TTCAGGTATT GATGTTGATG TTTGTCGTGG TGTTGCCGCT GCTGTATTTG GTGACGACAC GAAAGTGAAA TATACCCCAC TCACAGCAAA AGAACGCTTC ACGGCTTTAC AGTCAGGGGA AGTGGATTTG CTCTCCCGTA ATACGACCTG GACTTCATCT CGCGATGCCG GGATGGGAAT GGCATTTACT GGCGTCACTT ATTACGACGG CATTGGCTTC CTGACGCACG ATAAAGCGGG GCTAAAAAGC GCGAAAGAAC TGGATGGCGC TACCGTCTGT ATTCAGGCGG GTACTGATAC CGAACTCAAC GTCGCCGACT ATTTCAAGGC AAACAATATG AAGTACACAC CAGTGACTTT CGATCGTTCT GACGAATCAG CGAAGGCACT GGAATCCGGT CGCTGCGATA CGCTGGCTTC GGATCAATCC CAACTGTATG CCCTGCGCAT CAAATTAAGC AACCCGGCTG AATGGATTGT CTTACCGGAG GTTATCTCTA AAGAACCGCT TGGGCCGGTA GTTCGTCGTG GCGATGATGA ATGGTTCTCG ATTGTACGCT GGACGCTTTT CGCCATGCTA AATGCTGAAG AGATGGGCAT CAATTCCCAG AACGTCGATG AAAAAGCGGC TAATCCAGCA ACGCCTGATA TGGCACATCT GCTGGGTAAA GAAGGCGATT ACGGCAAGGA TCTGAAGTTG GATAATAAAT GGGCCTATAA CATCATCAAA CAGGTGGGTA ACTACTCGGA AATTTTCGAG CGTAACGTAG GTTCAGAAAG CCCGCTGAAA ATTAAACGTG GGCAAAATAA TCTCTGGAAT AACGGCGGTA TTCAGTACGC ACCGCCCGTG CGTTAA
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Protein sequence | MKKMMIATLA AASVLLAVAN QAHAGATLDA VQKKGFVQCG ISDGLPGFSY ADADGKFSGI DVDVCRGVAA AVFGDDTKVK YTPLTAKERF TALQSGEVDL LSRNTTWTSS RDAGMGMAFT GVTYYDGIGF LTHDKAGLKS AKELDGATVC IQAGTDTELN VADYFKANNM KYTPVTFDRS DESAKALESG RCDTLASDQS QLYALRIKLS NPAEWIVLPE VISKEPLGPV VRRGDDEWFS IVRWTLFAML NAEEMGINSQ NVDEKAANPA TPDMAHLLGK EGDYGKDLKL DNKWAYNIIK QVGNYSEIFE RNVGSESPLK IKRGQNNLWN NGGIQYAPPV R
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