| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4565 |
|---|
| Symbol | mreD |
|---|
| ID | 6971841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4235114 |
|---|
| End bp | 4235602 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643388276 |
|---|
| Product | rod shape-determining protein MreD |
|---|
| Protein accession | YP_002272711 |
|---|
| Protein GI | 209397202 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2891] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00217188 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.859989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAGCT ATCGTAGCCA GGGACGCTGG GTAATCTGGC TCTCTTTCCT CATTGCGCTT
TTGCTGCAAA TCATGCCCTG GCCGGATAAC CTGATTGTTT TCCGGCCAAA CTGGGTGTTA
CTCATCTTGT TGTATTGGAT CCTGGCCTTG CCCCATCGCG TAAATGTGGG CACAGGTTTT
GTGATGGGTG CCATACTGGA TCTGATCAGC GGCTCGACGC TTGGCGTACG CGTATTGGCG
ATGAGCATCA TTGCTTACCT GGTGGCGCTG AAATACCAGC TTTTCCGCAA CCTCGCATTA
TGGCAGCAGG CGCTGGTCGT CATGTTGCTT TCGCTGGTGG TGGATATTAT TGTTTTCTGG
GCAGAGTTTT TAGTGATTAA CGTCTCTTTC AGACCGGAAG TGTTCTGGAG TAGTGTAGTC
AATGGGGTGC TCTGGCCGTG GATTTTCTTG CTGATGCGTA AAGTCCGTCA GCAGTTTGCA
GTGCAATAA
|
|---|
| Protein sequence | MASYRSQGRW VIWLSFLIAL LLQIMPWPDN LIVFRPNWVL LILLYWILAL PHRVNVGTGF
VMGAILDLIS GSTLGVRVLA MSIIAYLVAL KYQLFRNLAL WQQALVVMLL SLVVDIIVFW
AEFLVINVSF RPEVFWSSVV NGVLWPWIFL LMRKVRQQFA VQ
|
|---|
| |