| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4520 |
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| Symbol | kdsC |
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| ID | 6967685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4186393 |
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| End bp | 4186959 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643388233 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
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| Protein accession | YP_002272668 |
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| Protein GI | 209397194 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.261696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.754275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAAG CAGGTGCGTC GCTTGCGACC TGTTACGGCC CTGTCAGCGC CGACGTTATA
GCAAAAGCAG AGAACATTCG TCTGCTAATC CTCGACGTTG ATGGCGTACT GTCAGATGGC
CTGATTTATA TGGGCAATAA CGGCGAAGAG CTGAAAGCGT TCAATGTTCG TGACGGTTAT
GGCATTCGTT GTGCGCTCAC CTCTGATATT GAAGTCGCTA TCATTACCGG GCGAAAGGCT
AAACTGGTAG AAGATCGTTG TGCCACATTG GGGATCACTC ACTTGTATCA GGGGCAGTCA
AACAAACTGA TCGCCTTTAG CGATCTGCTG GAAAAATTGG CGATTGCCCC GGAAAATGTG
GCTTATGTCG GCGATGATCT CATCGATTGG CCGGTAATGG AAAAAGTGGG TTTAAGCGTC
GCCGTGGCCG ATGCGCATCC ACTGTTGATC CCGCGCGCCG ATTACGTGAC GCGCATTGCT
GGCGGTCGTG GCGCAGTGCG AGAAGTTTGC GACTTATTAC TCCTGGCGCA GGGCAAACTG
GATGAAGCCA AAGGGCAATC GATATGA
|
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| Protein sequence | MSKAGASLAT CYGPVSADVI AKAENIRLLI LDVDGVLSDG LIYMGNNGEE LKAFNVRDGY
GIRCALTSDI EVAIITGRKA KLVEDRCATL GITHLYQGQS NKLIAFSDLL EKLAIAPENV
AYVGDDLIDW PVMEKVGLSV AVADAHPLLI PRADYVTRIA GGRGAVREVC DLLLLAQGKL
DEAKGQSI
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