| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4509 |
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| Symbol | ispB |
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| ID | 6970655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4177829 |
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| End bp | 4178800 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643388222 |
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| Product | octaprenyl diphosphate synthase |
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| Protein accession | YP_002272657 |
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| Protein GI | 209396313 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000159787 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTTAG AAAAAATCAA TGAGTTAACC GCGCAAGATA TGGCGGGTGT TAATGCGGCA
ATCCTTGAGC AGCTTAATTC CGACGTCCAA CTGATCAATC AGTTAGGCTA TTACATCGTC
AGCGGCGGCG GTAAACGTAT TCGTCCGATG ATTGCTGTAC TGGCTGCACG AGCTGTTGGC
TATGAGGGAA ATGCGCATGT CACCATTGCT GCCCTGATCG AGTTTATCCA CACGGCGACT
CTGCTGCACG ACGACGTTGT GGATGAATCA GATATGCGCA GGGGTAAAGC TACCGCCAAC
GCCGCATTTG GCAATGCCGC CAGCGTGCTG GTAGGCGATT TTATTTATAC CCGCGCGTTC
CAGATGATGA CCAGCCTCGG TTCACTCAAA GTGCTGGAAG TCATGTCAGA AGCCGTAAAC
GTCATCGCAG AAGGTGAAGT TCTGCAACTG ATGAATGTTA ACGATCCGGA CATCACTGAA
GAAAACTACA TGCGCGTTAT CTATAGCAAA ACCGCGCGTC TGTTTGAGGC TGCCGCGCAG
TGTTCCGGAA TTCTGGCGGG CTGTACGCCG GAGGAGGAGA AAGGCCTGCA GGATTATGGG
CGCTATCTCG GCACTGCTTT CCAGTTGATC GACGATTTAC TCGATTACAA TGCCGATGGC
GAACAGTTAG GTAAAAACGT CGGCGACGAT CTGAACGAAG GTAAACCGAC GCTGCCGCTG
CTGCATGCGA TGCATCATGG CACACCAGAA CAGGCACAGA TGATCCGTAC CGCCATCGAA
CAGGGTAACG GTCGCCATCT TCTGAAACCG GTTCTGGAAG CAATGAACGC TTGTGGATCT
CTTGAATGGA CGCGTCAGCG CGCCGAGGAA GAAGCAGACA AAGCCATCGC AGCGTTACAG
GTGCTCCCGG ACACCCCTTG GCGAGAAGCA CTCATCGGCC TCGCGCACAT CGCTGTTCAA
CGCGATCGTT AA
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| Protein sequence | MNLEKINELT AQDMAGVNAA ILEQLNSDVQ LINQLGYYIV SGGGKRIRPM IAVLAARAVG
YEGNAHVTIA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDFIYTRAF
QMMTSLGSLK VLEVMSEAVN VIAEGEVLQL MNVNDPDITE ENYMRVIYSK TARLFEAAAQ
CSGILAGCTP EEEKGLQDYG RYLGTAFQLI DDLLDYNADG EQLGKNVGDD LNEGKPTLPL
LHAMHHGTPE QAQMIRTAIE QGNGRHLLKP VLEAMNACGS LEWTRQRAEE EADKAIAALQ
VLPDTPWREA LIGLAHIAVQ RDR
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