Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4483 |
Symbol | pnp |
ID | 6970946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4153297 |
End bp | 4155432 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643388198 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_002272635 |
Protein GI | 209397723 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTAATC CGATCGTTCG TAAATTCCAG TACGGCCAAC ACACCGTGAC TCTGGAAACC GGCATGATGG CTCGTCAGGC TACTGCCGCT GTTATGGTTA GCATGGATGA CACCGCGGTA TTTGTTACCG TTGTTGGCCA GAAAAAAGCC AAACCAGGTC AGGACTTCTT CCCACTGACC GTTAACTATC AGGAGCGTAC CTACGCTGCT GGTCGTATCC CGGGTAGCTT CTTCCGTCGT GAAGGTCGTC CAAGCGAAGG CGAAACCCTG ATCGCGCGTC TGATTGACCG CCCGATTCGC CCGCTGTTCC CGGAAGGCTT CGTCAACGAA GTTCAGGTTA TCGCCACCGT GGTTTCTGTT AACCCGCAGG TTAACCCGGA TATCGTCGCG ATGATTGGTG CTTCCGCAGC ACTGTCTCTG TCTGGTATTC CGTTCAATGG CCCGATTGGT GCTGCCCGCG TAGGTTACAT CAATGACCAG TACGTACTGA ACCCGACTCA GGACGAGCTG AAAGAGAGCA AACTGGATCT GGTTGTTGCG GGTACTGAAG CCGCTGTACT GATGGTTGAA TCTGAAGCTG AACTGCTGAG CGAAGACCAG ATGCTGGGCG CAGTAGTGTT CGGTCATGAA CAACAGCAGG TTGTTATTCA GAACATCAAT GAACTGGTGA AAGAAGCCGG TAAACCGCGT TGGGACTGGC AGCCGGAGCC GGTAAACGAA GCGCTGAACG CGCGCGTTGC TGCACTGGCT GAAGCTCGTC TGAGCGATGC TTACCGCATC ACCGACAAAC AAGAGCGTTA TGCGCAGGTT GATGTCATCA AATCTGAAAC CATCGCGACG CTGCTTGCTG AAGACGAAAC CCTGGACGAA AACGAACTGG GTGAAATTCT GCACGCGATC GAGAAAAACG TTGTTCGTAG CCGCGTACTG GCAGGCGAAC CGCGTATCGA TGGTCGTGAA AAAGATATGA TCCGTGGTCT GGATGTGCGT ACTGGCGTGC TGCCGCGTAC TCACGGTTCT GCGCTGTTCA CCCGTGGTGA AACGCAGGCG CTGGTTACCG CAACGCTGGG TACTGCTCGT GACGCGCAGG TTCTTGATGA ACTGATGGGC GAACGTACCG ATACCTTCCT GTTCCACTAC AACTTCCCTC CGTACTCCGT AGGCGAAACC GGCATGGTCG GTTCTCCGAA GCGTCGTGAA ATTGGTCACG GTCGTCTGGC GAAGCGCGGC GTGCTGGCAG TAATGCCGGA TATGGACAAA TTCCCGTACA CCGTACGTGT TGTGTCTGAA ATCACTGAAT CCAACGGTTC TTCTTCTATG GCTTCCGTGT GCGGTGCGTC TCTGGCGCTG ATGGACGCAG GTGTGCCAAT CAAAGCTGCC GTTGCGGGTA TCGCAATGGG TCTGGTGAAA GAAGGCGACA ACTACGTTGT ACTGTCTGAC ATTTTGGGCG ACGAAGATCA CCTGGGCGAT ATGGACTTCA AAGTTGCGGG TTCCCGCGAC GGTATCTCTG CACTGCAGAT GGATATCAAA ATTGAAGGTA TCACCAAAGA GATCATGCAG GTTGCACTGA ACCAGGCTAA AGGTGCGCGT CTGCACATCC TGGGTGTAAT GGAACAGGCG ATCAACGCGC CACGTGGCGA TATCTCTGAG TTCGCTCCGC GTATCCATAC CATCAAGATC AACCCGGACA AGATCAAAGA CGTTATCGGT AAAGGCGGCT CTGTGATCCG TGCCCTGACC GAAGAAACTG GCACCACCAT CGAAATCGAA GATGACGGTA CTGTGAAGAT CGCAGCGACC GATGGCGAGA AAGCGAAACA CGCTATTCGT CGTATCGAAG AGATCACTGC AGAAATTGAA GTGGGCCGCG TCTACACTGG TAAAGTGACC CGTATCGTTG ACTTCGGCGC ATTTGTTGCC ATCGGCGGCG GTAAAGAAGG TCTGGTCCAC ATCTCTCAAA TCGCTGACAA ACGCGTTGAG AAAGTGACCG ATTACCTGCA GATGGGTCAG GAAGTACCGG TGAAAGTTCT GGAAGTTGAT CGCCAGGGCC GTATCCGTCT GAGCATTAAA GAAGCGACTG AGCAGTCTCA ACCTGCTGCA GCACCGGAAG CTCCGGCTGC TGAACAGGGC GAGTAA
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Protein sequence | MLNPIVRKFQ YGQHTVTLET GMMARQATAA VMVSMDDTAV FVTVVGQKKA KPGQDFFPLT VNYQERTYAA GRIPGSFFRR EGRPSEGETL IARLIDRPIR PLFPEGFVNE VQVIATVVSV NPQVNPDIVA MIGASAALSL SGIPFNGPIG AARVGYINDQ YVLNPTQDEL KESKLDLVVA GTEAAVLMVE SEAELLSEDQ MLGAVVFGHE QQQVVIQNIN ELVKEAGKPR WDWQPEPVNE ALNARVAALA EARLSDAYRI TDKQERYAQV DVIKSETIAT LLAEDETLDE NELGEILHAI EKNVVRSRVL AGEPRIDGRE KDMIRGLDVR TGVLPRTHGS ALFTRGETQA LVTATLGTAR DAQVLDELMG ERTDTFLFHY NFPPYSVGET GMVGSPKRRE IGHGRLAKRG VLAVMPDMDK FPYTVRVVSE ITESNGSSSM ASVCGASLAL MDAGVPIKAA VAGIAMGLVK EGDNYVVLSD ILGDEDHLGD MDFKVAGSRD GISALQMDIK IEGITKEIMQ VALNQAKGAR LHILGVMEQA INAPRGDISE FAPRIHTIKI NPDKIKDVIG KGGSVIRALT EETGTTIEIE DDGTVKIAAT DGEKAKHAIR RIEEITAEIE VGRVYTGKVT RIVDFGAFVA IGGGKEGLVH ISQIADKRVE KVTDYLQMGQ EVPVKVLEVD RQGRIRLSIK EATEQSQPAA APEAPAAEQG E
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