Gene ECH74115_4473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4473 
Symbol 
ID6967762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4143239 
End bp4143757 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content50% 
IMG OID643388187 
Productintracellular peptidase, PfpI family 
Protein accessionYP_002272624 
Protein GI209400672 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGA AAATTGCCGT TTTAATCACT GATGAATTTG AGGATTCAGA ATTTACTTCA 
CCCGCAGACG AGTTCCGTAA AGCCGGACAC GAAGTGATTA CCATTGAAAA ACAAGCGGGT
AAAACGGTGA AAGGCAAAAA AGGAGAAGCC AGCGTGACCA TCGATAAATC CATCGATGAA
GTGACGCCAG CGGAGTTTGA TGCCCTGTTG CTACCGGGCG GTCATTCACC GGATTATCTG
CGTGGCGACA ACCGTTTTGT CACCTTTACC CGTGATTTTG TGAATAGCGG CAAACCTGTT
TTCGCCATCT GTCACGGTCC GCAGCTGCTG ATCAGCGCCG ATGTGATTCG GGGGCGCAAA
CTGACCGCGG TTAAACCGAT CATTATTGAT GTTAAAAACG CGGGCGCGGA ATTTTACGAT
CAGGAAGTCG TGGTCGATAA AGATCAGCTG GTTACCAGCC GGACACCGGA CGATCTGCCA
GCGTTTAACC GCGAGGCGTT ACGCCTGCTC GGTGCCTGA
 
Protein sequence
MSKKIAVLIT DEFEDSEFTS PADEFRKAGH EVITIEKQAG KTVKGKKGEA SVTIDKSIDE 
VTPAEFDALL LPGGHSPDYL RGDNRFVTFT RDFVNSGKPV FAICHGPQLL ISADVIRGRK
LTAVKPIIID VKNAGAEFYD QEVVVDKDQL VTSRTPDDLP AFNREALRLL GA