Gene ECH74115_4471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4471 
Symbol 
ID6967401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4142476 
End bp4143111 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content56% 
IMG OID643388186 
ProductNAD dependent epimerase/dehydratase family protein 
Protein accessionYP_002272623 
Protein GI209396829 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG TACTGATTAC AGGCGCAACG GGGCTGGTGG GCGGTCACCT GCTGCGGATG 
TTGATTAACG AACCGAAAGT TAACGCCATA GCCGCGCCGA CGCGACGTCC GTTGGGCGAT
ATGCCCGGGG TATTTAATCC CCATGATCCG CAACTGACTG ACGCGCTGGC GCAGGTCACC
GATCCCATCG ACATTGTGTT TTGTTGTCTC GGCACCACGC GGCGAGAAGC GGGGAGCAAA
GAGGCGTTTA TTCATGCCGA TTACACGCTG GTAGTGGATA CCGCATTAAC CGGGCGGCGA
CTGGGCGCGC AGCATATGCT GGTGGTCAGT GCTATGGGTG CCAATGCCCA CTCGCCGTTT
TTCTATAACC GCGTCAAAGG GGAGATGGAA GAAGCATTAA TCGCCCAGAA CTGGCCGAAA
TTGACCATTG CTCGCCCGTC GATGTTACTG GGCGATCGTA GCAAACAGCG GATGAACGAA
ACGCTTTTTG CGCCGCTGTT CCGTTTGTTA CCCGGTAACT GGAAATCCAT TGATGCGAGA
GACGTGGCGC GGGTCATGCT GGCAGAGGCG ATGCGGCCCG AGCATGAAGG TGTGACGATT
TTAAGCTCTT CAGAATTACG CAAAAGAGCT GAATAA
 
Protein sequence
MSQVLITGAT GLVGGHLLRM LINEPKVNAI AAPTRRPLGD MPGVFNPHDP QLTDALAQVT 
DPIDIVFCCL GTTRREAGSK EAFIHADYTL VVDTALTGRR LGAQHMLVVS AMGANAHSPF
FYNRVKGEME EALIAQNWPK LTIARPSMLL GDRSKQRMNE TLFAPLFRLL PGNWKSIDAR
DVARVMLAEA MRPEHEGVTI LSSSELRKRA E