| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4449 |
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| Symbol | agaE |
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| ID | 6970580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4123788 |
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| End bp | 4124666 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643388169 |
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| Product | PTS system N-acetylgalactosamine-specific, IID component |
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| Protein accession | YP_002272606 |
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| Protein GI | 209400408 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
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| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.340341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCTA ATCAAACCAC CCTGCCGAAC GTCAGTGAAA ACGAAGAAAC ATTGCTGACT
GGCGTCAATG AAAACGTGTA TGAAGATCAG AGCATTGGCG CGGAGCTGAC GAAAAAAGAT
ATCAATCGCG TCGCCTGGCG TTCCATGCTG TTACAAGCGT CTTTTAACTA CGAACGTATG
CAGGCTTCCG GCTGGTTGTA CGGTCTGCTG CCTGCTCTGA AAAAGATCCA CACTAATAAA
CGCGACCTGG CGCGCGCCAT GAAGGGGCAT ATGGGTTTCT TCAATACCCA TCCGTTTCTG
GTGACATTTG TTATCGGCAT TATCCTTGCG ATGGAGCGTT CTAAGCAGGA CGTTAACAGT
ATTCAGAGCA CCAAAATTGC CGTCGGTGCG CCGCTCGGCG GGATTGGCGA TGCAATGTTC
TGGCTAACGC TACTGCCGAT TTGTGGCGGG ATTGGAGCCA GTCTGGCATT GCAAGGCTCC
ATTCTTGGCG CAGTCGTCTT TATTGTGCTG TTCAACGTGG TCCACCTGGG GCTGCGTTTT
GGTCTGGCGC ATTATGCTTA CCGCATGGGC GTGGCGGCGA TTCCACTCAT TAAAGCTAAT
ACCAAAAAAG TCGGCCATGC TGCGTCTATC GTTGGGATGA CGGTAATCGG TGCGCTGGTG
GCAACCTATG TTCGTTTAAG CACCACGCTG GAAATCACAG CGGGCGACGC AGTGGTTAAG
TTACAGGCTG ATGTTATCGA CAAACTGATG CCTGCCTTCT TACCGTTGGT CTACACCCTG
ACCATGTTTT GGTTGGTACG CCGCGGCTGG AGTCCGCTGC GTCTGATTGC AGTTACCGTG
GTTCTCGGCA TCGTTGGTAA ATTCTGCCAT TTCCTTTAA
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| Protein sequence | MASNQTTLPN VSENEETLLT GVNENVYEDQ SIGAELTKKD INRVAWRSML LQASFNYERM
QASGWLYGLL PALKKIHTNK RDLARAMKGH MGFFNTHPFL VTFVIGIILA MERSKQDVNS
IQSTKIAVGA PLGGIGDAMF WLTLLPICGG IGASLALQGS ILGAVVFIVL FNVVHLGLRF
GLAHYAYRMG VAAIPLIKAN TKKVGHAASI VGMTVIGALV ATYVRLSTTL EITAGDAVVK
LQADVIDKLM PAFLPLVYTL TMFWLVRRGW SPLRLIAVTV VLGIVGKFCH FL
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