| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4448 |
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| Symbol | agaW |
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| ID | 6971176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4123019 |
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| End bp | 4123798 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643388168 |
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| Product | PTS system, N-acetylgalactosamine-specific, IIC component |
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| Protein accession | YP_002272605 |
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| Protein GI | 209399451 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.601715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAATCA GTCTGTTGCA GGCATTCGCG TTGGGCATTA TCGCCTTTAT CGCTGGCCTG
GATATGTTTA ACGGCTTAAC CCATATGCAC CGCCCAGTGG TCCTCGGCCC GTTAGTCGGG
CTGGTACTTG GCGATCTGCA TACCGGTATT TTAACCGGCG GTACGCTGGA ACTGGTGTGG
ATGGGGCTGG CCCCGCTGGC GGGCGCACAG CCGCCTAATG TGATTATCGG TACTATCGTC
GGCACGGCGT TTGCCATTAC TACTGGCGTG AAACCCGATG TCGCAGTCGG TGTCGCCGTA
CCTTTCGCTG TCGCAGTACA GATGGGGATT ACCTTCCTGT TCTCGGTGAT GTCTGGCGTG
ATGTCTCGCT GCGACCGGAT GGCGGAGAAC GCCGATACTC GCGGCATTGA ACGCGTAAAC
TATCTGGCAC TGCTGGCACT CGGCACTTTC TATTTTCTCT GCGCTTTCCT GCCTATCTAC
TTCGGCGCGG AACATGCAAA AACCATCATT GATGTCCTGC CGCAACGATT AATCGACGGC
CTCGGCGTCG CGGGCGGCAT CATGCCAGCA ATCGGTTTTG CCGTGCTGCT GAAAATCATG
ATGAAAAACG TCTACATCCC CTACTTCATC CTGGGCTTTG TTGCCGCAGC CTGGCTCAAG
TTACCGGTGC TGGCTATTGC TGCCGCCGCG CTGGCGATGG CGCTGATCGA TCTGCTGCGT
AAATCTCCTG AACCGACTCA ACCTGCGGCA CAGAAAGAGG AATTTGAAGA TGGCATCTAA
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| Protein sequence | MEISLLQAFA LGIIAFIAGL DMFNGLTHMH RPVVLGPLVG LVLGDLHTGI LTGGTLELVW
MGLAPLAGAQ PPNVIIGTIV GTAFAITTGV KPDVAVGVAV PFAVAVQMGI TFLFSVMSGV
MSRCDRMAEN ADTRGIERVN YLALLALGTF YFLCAFLPIY FGAEHAKTII DVLPQRLIDG
LGVAGGIMPA IGFAVLLKIM MKNVYIPYFI LGFVAAAWLK LPVLAIAAAA LAMALIDLLR
KSPEPTQPAA QKEEFEDGI
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