Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4442 |
Symbol | garD |
ID | 6967518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4117600 |
End bp | 4119171 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643388162 |
Product | galactarate dehydratase |
Protein accession | YP_002272599 |
Protein GI | 209395943 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.648393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACA TCGAAATCAG ACAAGAAACG CCAACTGCGT TTTATATAAA AGTTCACGAC ACAGATAATG TGGCAATTAT TGTTAATGAT AATGGCCTGA AAGCAGGAAC GCGTTTTCCG GATGGGCTGG AATTAATTGA ACATATTCCC CAGGGGCATA AAGTCGCATT GCTCGACATT CCGGCTAATG GTGAAATTAT TCGTTATGGC GAAGTGATTG GTTACGCCGT GCGTGCAATC CCACGCGGAA GCTGGATCGA CGAATCAATG GTTGTACTGC CGAAAGCGCC GCCGTTACAC ACGCTGCCAC TGGCAACCAA AGTCCCGGAA CCCTTACCGC CGCTGGAAGG ATACACCTTT GAGGGCTATC GCAATGCCGA TGGCAGCGTG GGCACCAAAA ACCTGCTCGG CATCACCACC AGCGTCCACT GTGTGGCAGG CGTGGTGGAC TACGTAGTAA AAATCATTGA ACGCGATCTG CTACCGAAAT ACCCGAACGT CGATGGCGTG GTGGGGCTGA ATCATTTGTA CGGTTGTGGC GTGGCGATTA ACGCACCGGC GGCAGTTGTA CCTATCCGTA CCATTCACAA TATTTCGCTG AATCCTAACT TTGGCGGCGA AGTAATGGTG ATTGGCCTGG GTTGTGAAAA GTTGCAGCCT GAGCGCCTGC TGACTGGAAC GGATGATGTG CAAGCTATTC CAGTAGAAAG CGCCAGCATT GTCAGTTTGC AGGATGAAAA GCATGTCGGT TTTCAGTCCA TGGTCGAGGA TATTTTGCAG GTCGCCGAAC GCCATCTACA AAAACTGAAT CAACGTCAGC GAGAAACCTG TCCGGCTTCA GAACTGGTTG TCGGCATGCA GTGCGGTGGC AGCGATGCCT TTTCTGGCGT AACGGCAAAC CCGGCGGTTG GGTATGCGTC TGATCTACTG GTGCGCTGCG GCGCAACGGT GATGTTCTCA GAAGTCACGG AAGTGCGTGA CGCGATCCAT CTGCTGACAC CACGCGCAGT GAACGAAGAG GTCGGCAAAC GGCTGCTGGA GGAGATGGAG TGGTACGATA ACTATCTCAA TATGGGAAAA ACCGACCGCA GCGCCAACCC TTCGCCGGGC AACAAGAAAG GCGGTCTGGC AAATGTAGTG GAGAAAGCGC TCGGCTCCAT TGCTAAATCG GGTAAAAGTG CAATTGTTGA AGTGCTGTCG CCCGGTCAAC GCCCGACTAA ACGCGGATTA ATTTACGCCG CGACGCCAGC CAGCGATTTT GTCTGTGGCA CGCAACAGGT GGCTTCGGGT ATCACCGTGC AAGTGTTTAC GACCGGTCGT GGTACGCCGT ACGGCCTGAT GGCGGTACCC GTCATTAAAA TGGCGACCCG CACCGAGCTG GCGAACCGCT GGTTTGATTT AATGGATATT AACGCGGGCA CTATCGCCAC CGGCGAAGAA ACCATTGAAG AGGTGGGCTG GAAGTTGTTC CACTTTATTC TCGACGTCGC CAGCGGGAAG AAGAAAACCT TCTCGGATCA ATGGGGACTG CATAACCAGC TGGCGGTGTT TAACCCAGCA CCGGTGACCT GA
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Protein sequence | MANIEIRQET PTAFYIKVHD TDNVAIIVND NGLKAGTRFP DGLELIEHIP QGHKVALLDI PANGEIIRYG EVIGYAVRAI PRGSWIDESM VVLPKAPPLH TLPLATKVPE PLPPLEGYTF EGYRNADGSV GTKNLLGITT SVHCVAGVVD YVVKIIERDL LPKYPNVDGV VGLNHLYGCG VAINAPAAVV PIRTIHNISL NPNFGGEVMV IGLGCEKLQP ERLLTGTDDV QAIPVESASI VSLQDEKHVG FQSMVEDILQ VAERHLQKLN QRQRETCPAS ELVVGMQCGG SDAFSGVTAN PAVGYASDLL VRCGATVMFS EVTEVRDAIH LLTPRAVNEE VGKRLLEEME WYDNYLNMGK TDRSANPSPG NKKGGLANVV EKALGSIAKS GKSAIVEVLS PGQRPTKRGL IYAATPASDF VCGTQQVASG ITVQVFTTGR GTPYGLMAVP VIKMATRTEL ANRWFDLMDI NAGTIATGEE TIEEVGWKLF HFILDVASGK KKTFSDQWGL HNQLAVFNPA PVT
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