Gene ECH74115_4420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4420 
Symbol 
ID6968168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4096030 
End bp4096926 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content55% 
IMG OID643388141 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002272578 
Protein GI209398065 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0786567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG AAAGGGCATT AACGCTGGAA GCACTACGGG TTATGGATGC GATCGATCGC 
CGGGGCAGTT TTGCGGCGGC AGCGGATGAG CTGGGACGCG TGCCTTCCGC ACTTAGCTAC
ACCATGCAAA AACTGGAAGA AGAGCTGGAT GTGGTGCTGT TTGACCGCTC GGGCCATCGC
ACCAAATTCA CCAATGTCGG GAGGATGTTG TTGGAGCGAG GGCGCGTTTT GCTGGAAGCC
GCAGATAAAC TGACTACTGA TGCGGAAGCT CTCGCGCGCG GTTGGGAAAC GCATCTCACC
ATTGTGACCG AAGCGCTGGT ACCGACACCT GCCTTTTTCC CGTTAATCGA CAAACTGGCG
GCAAAAGCCA ATACCCAACT GGCAATCATC ACAGAAGTGC TGGCGGGGGC GTGGGAACGG
CTGGAGCAGG GGCGGGCGGA TATTGTTATC GCGCCGGATA TGCATTTTCG TTCCTCGTCG
GAGATCAACT CGCGCAAGCT CTATACGTTA ATGAACGTCT ACGTTGCCGC GCCTGATCAC
CCGATTCATC AGGAGCCGGA ACCGTTATCT GAAGTGACGC GTGTGAAATA TCGTGGAATT
GCGGTGGCGG ATACCGCTCG TGAGCGCCCG GTGTTGACTG TACAGCTGCT GGACAAACAG
CCGCGCTTAA CGGTGAGCAC GATTGAAGAT AAACGTCAGG CATTACTGGC GGGGCTTGGC
GTGGCGACGA TGCCGTATCC GATGGTCGAA AAAGATATTG CGGAAGGGCG GTTGCGTGTC
GTCAGCCCGG AATCGACCAG CGAGATCGAT ATTATTATGG CCTGGCGTCG TGACAGTATG
GGGGAAGCGA AATCCTGGTG TCTGCGGGAA ATTCCCAAAC TTTTTAACGG AAAATAA
 
Protein sequence
MAKERALTLE ALRVMDAIDR RGSFAAAADE LGRVPSALSY TMQKLEEELD VVLFDRSGHR 
TKFTNVGRML LERGRVLLEA ADKLTTDAEA LARGWETHLT IVTEALVPTP AFFPLIDKLA
AKANTQLAII TEVLAGAWER LEQGRADIVI APDMHFRSSS EINSRKLYTL MNVYVAAPDH
PIHQEPEPLS EVTRVKYRGI AVADTARERP VLTVQLLDKQ PRLTVSTIED KRQALLAGLG
VATMPYPMVE KDIAEGRLRV VSPESTSEID IIMAWRRDSM GEAKSWCLRE IPKLFNGK