Gene ECH74115_4400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4400 
Symbol 
ID6969664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4079254 
End bp4079946 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content52% 
IMG OID643388122 
Productputative SanA protein 
Protein accessionYP_002272559 
Protein GI209400696 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.801219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCG CATTTGCCCG CCTTCTTCTC CGTATTTGTT TTTCTCGCCG GACTCTAAAG 
ATTGCCTGCT TACTGTTACT TGTGGCAGGA GCGACCATTT TTATCGCCGA TCGCGTAATG
GTCAACGCCA GCAAACAGCT GACCTGGAGC GACGTCAACG TCGTTCCGGC GCGTAACGTG
GGCTTATTGC TGGGGGCCAG GCCGGGTAAT CGCTACTTTA CCCGACGTAT TGATACCGCA
GCAGAGTTGT ACCACGCCGG AAAAGTGAAA TGGCTGCTGG TCAGTGGCGA TAACGGACGT
AAAAATTACG ATGAAGCGTC AGGCATGCAG CAGGCTTTGA TCGCAAAGGG CGTACCGGCA
AAAGTGATCT TCTGTGACTA TGCCGGATTC TCAACGCTTG ATTCAGTGGT GCGTGCCAAT
AAAGTGTTTG GGGAGAACCA TATCACCATT ATCTCGCAGG AATTTCATAA CCAACGCGCC
ATCTGGCTGG CAAAACAATA CGGCATCGAT GCTATCGGGT TTAACGCACC AGACCTGGAA
AAAGGACGCG GAAAGATTGT CCGTCTGCGA GAGAAACTCG CCAGAGTCAG CGCGGTGATT
GACGCGAAAA TCTTCAATCG TCAGCCAAAA TATCTCGGGC CGTCGGTCAT TATTGGTCCG
TTTAGTGAGC ATGGTTGTCC GGCGCAGAAA TAA
 
Protein sequence
MLRAFARLLL RICFSRRTLK IACLLLLVAG ATIFIADRVM VNASKQLTWS DVNVVPARNV 
GLLLGARPGN RYFTRRIDTA AELYHAGKVK WLLVSGDNGR KNYDEASGMQ QALIAKGVPA
KVIFCDYAGF STLDSVVRAN KVFGENHITI ISQEFHNQRA IWLAKQYGID AIGFNAPDLE
KGRGKIVRLR EKLARVSAVI DAKIFNRQPK YLGPSVIIGP FSEHGCPAQK