Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4398 |
Symbol | |
ID | 6968385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4077453 |
End bp | 4078589 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643388120 |
Product | methyltransferase family protein |
Protein accession | YP_002272557 |
Protein GI | 209399561 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.468721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACT TAGACAACGG TTTCCGTTCA CTGACACTAC AACGTTTTCC GGCGACGGAT GACGTTAACC CGCTACAGGC GTGGGAAGCG GCGGATGAAT ATTTGCTGCA ACAGTTGGAC GACACAGAAA TCCGCGGCCC GGTGTTGATC CTGAATGATG CCTTTGGTGC GTTAAGCTGC GCGCTGGCGG AACATAAGCC GTACAGCATT GGCGACTCAT ACATCAGTGA ACTGGCGACG CGCGAGAATT TACGCCTCAA CGGGATTGAT GAGTCGAGCG TGAAGTTTCT CGACAGCACC GCCGACTACC CGCAACAGCC GGGTGTGGTG CTGATCAAAG TGCCGAAAAC ACTGGCATTG CTGGAACAGC AACTGCGTGC GCTGCGCAAA GTGGTCACGC CACAAACACG TATTATTGCC GGTGCCAAAG CCCGTGACAT CCACACTTCC ACGCTGGAAC TATTCGAAAA AGTGCTCGGC CCGACCACCA CCACGCTGGC ATGGAAGAAA GCGCGCCTGA TTAACTGCAC TTTCAATGAA CCACCGCTGG CCGATGCGCC GCAGACCGTT AGCTGGAAGC TGGAAGGTAC TGACTGGACT ATCCACAACC ATGCGAATGT CTTCTCCCGC ACCGGGCTGG ATATCGGCGC GCGCTTCTTT ATGCAACATC TGCCAGAGAA TCTCGAAGGG GAGATTGTCG ATCTCGGTTG CGGTAATGGC GTTATTGGTC TGACGCTGCT TGATAAAAAC CCGCAGGCGA AAGTGGTGTT TGTCGATGAA TCGCCGATGG CGGTTGCTTC CAGCCGTTTG AACGTTGAAA CCAACATGCC AGAGGCGTTG GATCGCTGCG AATTTATGAT CAACAACGCG CTCTCCGGCG TGGAGCCTTT CCGCTTTAAT GCTGTGCTCT GCAACCCGCC GTTTCATCAG CAACATGCGC TGACCGATAA CGTCGCCTGG GAGATGTTCC ACCACGCCCG CCGCTGCCTG AAAATCAACG GCGAGCTGTA TATCGTTGCC AACCGTCACC TGGATTACTT CCATAAACTG AAGAAAATTT TCGGCAACTG CACCACCATC GCCACGAATA ATAAATTTGT GGTGCTGAAA GCAGTGAAGC TGGGGCGTCG TCGGTAA
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Protein sequence | MSHLDNGFRS LTLQRFPATD DVNPLQAWEA ADEYLLQQLD DTEIRGPVLI LNDAFGALSC ALAEHKPYSI GDSYISELAT RENLRLNGID ESSVKFLDST ADYPQQPGVV LIKVPKTLAL LEQQLRALRK VVTPQTRIIA GAKARDIHTS TLELFEKVLG PTTTTLAWKK ARLINCTFNE PPLADAPQTV SWKLEGTDWT IHNHANVFSR TGLDIGARFF MQHLPENLEG EIVDLGCGNG VIGLTLLDKN PQAKVVFVDE SPMAVASSRL NVETNMPEAL DRCEFMINNA LSGVEPFRFN AVLCNPPFHQ QHALTDNVAW EMFHHARRCL KINGELYIVA NRHLDYFHKL KKIFGNCTTI ATNNKFVVLK AVKLGRRR
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