Gene ECH74115_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4396 
Symbol 
ID6970307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4076442 
End bp4076858 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content48% 
IMG OID643388118 
Producthelix-turn-helix DNA-binding domain protein 
Protein accessionYP_002272555 
Protein GI209398621 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCGA TTGCCGACAT CTTGCATGCA GGAGAAAAGC TAACTGCTGT GGCACCTTTT 
CTGGCGGGTA TTCAGAACGA GGAACAATAC ATCCAGGCGC TGGAACTGGT AGATCATCTG
CTGCTCAACG ATCCTGAAAA CCCCTTACTG GATCTGGTGT GTGCCAAAAT AACCGCGTGG
GAAGAATCAG CGCCCGAATT TGCGGAATTT AATGCCATGG CTCAAGCCAT GCCTGGCGGT
ATAGCCGTGA TTCGTACCCT TATGGATCAA TATGGTTTAA CCCTTTCCGA TCTGCCGGAA
ATTGGCAGTA AATCTATGGT GTCACGCGTT TTGAGCGGGA AGAGGAAATT AACGCTGGAA
CACGCTAAAA AATTGGCAAC GCGATTCGGC ATTTCTCCCG CCTTGTTTAT TGATTAA
 
Protein sequence
MIAIADILHA GEKLTAVAPF LAGIQNEEQY IQALELVDHL LLNDPENPLL DLVCAKITAW 
EESAPEFAEF NAMAQAMPGG IAVIRTLMDQ YGLTLSDLPE IGSKSMVSRV LSGKRKLTLE
HAKKLATRFG ISPALFID