Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4394 |
Symbol | |
ID | 6967597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4071502 |
End bp | 4073853 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643388116 |
Product | putative glycosyl hydrolase |
Protein accession | YP_002272553 |
Protein GI | 209396102 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATCA AAACTATTTT AACGCCAGTA ACCTGCGCTC TGCTGATAAG TTTTTCCGCC CATGCCACTA ACGCCGACAA TTATAAAAAC GTGATTAACC GTACTGGTGC GCCGCAGTAC ATGAAGGATT ACGATTACGA CGATCACCAG CGTTTTAATC CGTTTTTCGA TCTCGGAGCC TGGCATGGTC ATCTGTTGCC AGACGGCCCG AACACCATGG GCGGCTTTCC GGGCGTTGCG CTGCTGACGG AAGAATACAT CAACTTTATG GCCAGCAATT TCGACCGCCT GACCGTCTGG CAGGACGGCA AGAAAGTCAA CTTCACGCTG GAGGCATACA ATATTCCCGG CGCGCTGGTG CAAAAACTGA CAGCAAAAGA TGTGCAGGTC GAAATGACTC TGCGCTTCGC CACGCCGCGC ACGTCACTAC TGGAAACTAA AATCATCAGC AATAAACCGC TGGATCTGGT GTGGGATGGC GAACTGCTGG AAAAACTGGA AGCGAAAGAA GGGAAACCGC TTTCCGATAA AACCATTGCT GGCGAATACC CTGACTACCA GCGCAAAATC AGCGCCACCC GTGATGGCCT GAAAGTCACC TTTGGCAAAG TGCGCGCCAC CTGGGATCTG CTGACCTCCG GTGAATCAGA ATATCAGGTG CATAAATCCC TGCCGGTGCA GACTGAAATC AACGGCAATC GCTTTACCAG TAAGGCGCAT ATCAACGGTT CGACGACGCT CTATACCACC TATTCCCATC TGCTGACCTC TCAGGAAGTT AGCAAAGAGC AAATGCAGAT CCGCGATATT CTGGCGCGTC CGGCGTTTTA TCTCACCGCC TCGCAGCAAC GCTGGGAAGA GTATCTGAAG AAAGGGTTAA CCAATCCGGA TGCGACGCCG GAACAGACAC GCGTCGCGGT GAAAGCGATC GAAACGCTCA ACGGTAACTG GCGCTCGCCT GGGGGTGCGG TGAAATATAA CACCGTCACG CCGTCGGTGA CCGGGCGCTG GTTCTCCGGC AATCAGACCT GGCCGTGGGA TACCTGGAAG CAGGCGTTTG CGATGGCGCA TTTCAATCCG GACATCGCCA AAGAGAATAT CCGCGCGGTC TTCTCCTGGC AGATCCAGCC TGGCGACAGC GTGCGTCCGC AGGATGTGGG CTTTGTCCCC GACCTGATAG CGTGGAATCT TAGCCCCGAG CGTGGTGGCG ATGGTGGCAA CTGGAACGAA CGAAATACCA AACCCAGCCT TGCCGCCTGG TCGGTGATGG AAGTGTACAA CGTCACCCAG GATAAAACCT GGGTGGCAGA GATGTACCCG AAACTGGTGG CCTATCACGA CTGGTGGTTA CGTAACCGCG ATCACAACGG CAACGGCGTG CCGGAATATG GCGCGACCCG CGACAAAGCC CACAACACTG AGAGCGGCGA GATGCTGTTT ACGGTGAAGA AAGGCAACAA AGAAGAGACG CAGTCTGGGC TGAACAACTA CGCCCGCGTG GTGGAGAAAG GCCAGTACGA CAGTCTGGAA ATTCCGGCAC AGGTTGCTGC ATCGTGGGAA TCGGGGCGTG ATGATGCCGC CGTCTTTGGG TTTATCGACA AAGAACAGCT GGATAAATAT GTCGCAAGCG GCGGCAAACG TAGCGACTGG ACAGTGAAAT TCGCCGAAAA CCGCAGTCAG GACGGAACGT TGCTGGGGTA CTCGCTATTG CAGGAGTCGG TGGATCAGGC CAGCTATATG TACAGCGATA ACCATTATCT GGCGGAGATG GCGACGATTC TCGGTAAACC GGAAGAGGCT AAGCGCTATC GCCAGTTGGC ACAGCAGCTC GCGGACTACA TCAACACCTG TATGTTCGAC CCGGCTACGC AGTACTTCTA TGACGTGCGT ATTGAAGATA AACCGCTGGC GAACGGCTGC GCGGGCAAAC CGATTGTTGA GCGCGGTAAA GGGCCGGAAG GCTGGTCGCC GCTGTTTAAC GGTGCGGCAA CGCAGGCCAA TGCCGACGCG GTGGTGAAGG TGATGCTCGA TCCTAAAGAG TTCAATACCT TTGTTCCGCT GGGAACGGCG GCGTTAACCA ATCCGGCCTT TGGCGCTGAT ATCTACTGGC GCGGGCGCGT ATGGGTGGAT CAGTTCTGGT TTGGTCTGAA AGGGATGGAG CGTTACGGTT ATCGCGATGA TGCCCTGAAA CTGGCGGATA CGTTCTTCCG GCACGCCAAA GGGTTAACCG CCGATGGCCC AATTCAGGAA AATTACAACC CGCTGACAGG CGCACAGCAA GGCGCACCAA ATTTCTCCTG GAGTGCCGCA CATTTTTATA TGTTGTATAA CGATTTTTTC CGTAAGCAAT AA
|
Protein sequence | MKIKTILTPV TCALLISFSA HATNADNYKN VINRTGAPQY MKDYDYDDHQ RFNPFFDLGA WHGHLLPDGP NTMGGFPGVA LLTEEYINFM ASNFDRLTVW QDGKKVNFTL EAYNIPGALV QKLTAKDVQV EMTLRFATPR TSLLETKIIS NKPLDLVWDG ELLEKLEAKE GKPLSDKTIA GEYPDYQRKI SATRDGLKVT FGKVRATWDL LTSGESEYQV HKSLPVQTEI NGNRFTSKAH INGSTTLYTT YSHLLTSQEV SKEQMQIRDI LARPAFYLTA SQQRWEEYLK KGLTNPDATP EQTRVAVKAI ETLNGNWRSP GGAVKYNTVT PSVTGRWFSG NQTWPWDTWK QAFAMAHFNP DIAKENIRAV FSWQIQPGDS VRPQDVGFVP DLIAWNLSPE RGGDGGNWNE RNTKPSLAAW SVMEVYNVTQ DKTWVAEMYP KLVAYHDWWL RNRDHNGNGV PEYGATRDKA HNTESGEMLF TVKKGNKEET QSGLNNYARV VEKGQYDSLE IPAQVAASWE SGRDDAAVFG FIDKEQLDKY VASGGKRSDW TVKFAENRSQ DGTLLGYSLL QESVDQASYM YSDNHYLAEM ATILGKPEEA KRYRQLAQQL ADYINTCMFD PATQYFYDVR IEDKPLANGC AGKPIVERGK GPEGWSPLFN GAATQANADA VVKVMLDPKE FNTFVPLGTA ALTNPAFGAD IYWRGRVWVD QFWFGLKGME RYGYRDDALK LADTFFRHAK GLTADGPIQE NYNPLTGAQQ GAPNFSWSAA HFYMLYNDFF RKQ
|
| |