Gene ECH74115_4389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4389 
SymbolebgR 
ID6970267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4064080 
End bp4065063 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content51% 
IMG OID643388111 
ProductDNA-binding transcriptional repressor EbgR 
Protein accessionYP_002272548 
Protein GI209399661 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC TAAAAGACAT CGCAATCGAA GCTGGCGTAT CCCTGGCGAC AGTATCCAGG 
GTCTTAAATG ACGATCCGAC ATTGAATGTG AAAGAAGAGA CGAAACATCG CATTCTCGAG
ATCGCCGAAA AGCTGGAGTA CAAGACCAGT AGCGCCCGTA AACTACAGAC AGGCGCAGTC
AACCAACACC ATATTCTGGC TATCTACAGC TACCAGCAGG AGCTGGAGAT CAACGATCCT
TACTATCTGG CGATCCGCCA CGGCATTGAA ACTCAGTGCG AAAAGCTGGC GATCGAACTG
ACCAACTGTT ATGAACACAG CGGATTACCA GACATTAAAA ACGTCACCGG TATTTTAATT
GTCGGCAAAC CCACGCCCGC CCTGCGCGCC GCTGCCAGCG CGTTGACCGA CAATATCTGT
TTTATCGACT TTCACGAACC CGGCAGCGGT TACGATGCGG TGGATATCGA TCTGGCACGC
ATCAGTAAAG AAATCATCGA CTTCTATATC AACCAGGGCG TTAATCGTAT TGGTTTTATT
GGCGGTGAAG ATGAGCCTGG CAAGGCGGAT ATTCGTGAGG TCGCCTTTGC GGAATATGGC
CGACTGAAAC AAGTGGTACG CGAAGAGGAT ATCTGGCGCG GCGGTTTTTC CAGTTCGTCG
GGTTATGAAC TGGCAAAACA AATGCTGGCG CGGGAAGACT ATCCGAAGGC ACTGTTTGTT
GCTTCCGATT CCATTGCTAT CGGCGTACTG CGGGCGATTC ATGAACGTGG TCTGAACATC
CCACAGGATA TTTCGCTTAT CAGCGTTAAC GATATCCCCA CCGCGCGATT TACCTTTCCG
CCGCTCTCCA CCGTGCGCAT CCATTCCGAA ATGATGGGAA GTCAGGGCGT AAACCTGGTG
TATGAAAAAG CCCGCGATGG TCGCGCGCTG CCGCTGTTAG TCTTCGTTCC CAGCAAATTA
AAACTGCGCG GCACGACCCG TTAA
 
Protein sequence
MATLKDIAIE AGVSLATVSR VLNDDPTLNV KEETKHRILE IAEKLEYKTS SARKLQTGAV 
NQHHILAIYS YQQELEINDP YYLAIRHGIE TQCEKLAIEL TNCYEHSGLP DIKNVTGILI
VGKPTPALRA AASALTDNIC FIDFHEPGSG YDAVDIDLAR ISKEIIDFYI NQGVNRIGFI
GGEDEPGKAD IREVAFAEYG RLKQVVREED IWRGGFSSSS GYELAKQMLA REDYPKALFV
ASDSIAIGVL RAIHERGLNI PQDISLISVN DIPTARFTFP PLSTVRIHSE MMGSQGVNLV
YEKARDGRAL PLLVFVPSKL KLRGTTR