Gene ECH74115_4384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4384 
Symbol 
ID6972204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand+ 
Start bp4059393 
End bp4060016 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID643388106 
Producttranscriptional regulator, PadR family 
Protein accessionYP_002272543 
Protein GI209400481 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.19199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATC ATCACGAAGG GTGTTGTAAA CATGAAGGCC AGCCACGCCA TGAGGGCTGC 
TGCAAAGGTG AGAAGTCAGA ACACGAGCAC TGCGGACACG GTCACCAGCA TGAACACGGT 
CAATGTTGCG GTGGTCGCCA CGGTCGCGGC GGCGGTCGTC GGCAACGTTT CTTTGGTCAC 
GGTGAATTGC GTCTGGTGAT TCTGGATATT CTCTCGCGCG ATGACAGCCA CGGTTACGAA 
TTGATTAAAG CGATTGAGAA TCTAACCCAA GGGAATTACA CCCCAAGCCC GGGCGTCATC 
TACCCGACGC TGGATTTTCT GCAGGAGCAG TCGCTGATTA CCATCCGCGA AGAGGAAGGT 
GGTAAGAAGC AGATTGCGCT GACCGAACAA GGCGCGCAGT GGCTGGAAGA AAACCGCGAA 
CAGGTGGAGA TGATTGAAGA ACGCATCAAA GCGCGTTGCG TTGGCGCTGC GCTGCGCCAG 
AACCCGCAAA TGAAGCGGGC GCTAGATAAT TTTAAAGCGG TGCTGAATTT ACGCGTCAAC 
CAGAGTGATA TCACTGATGC ACAAATAAAA AAGATCATTG CGGTGATCGA CCGCGCCGCT 
TTTGATATTA CGCAACTGGA TTAA
 
Protein sequence
MSHHHEGCCK HEGQPRHEGC CKGEKSEHEH CGHGHQHEHG QCCGGRHGRG GGRRQRFFGH 
GELRLVILDI LSRDDSHGYE LIKAIENLTQ GNYTPSPGVI YPTLDFLQEQ SLITIREEEG 
GKKQIALTEQ GAQWLEENRE QVEMIEERIK ARCVGAALRQ NPQMKRALDN FKAVLNLRVN 
QSDITDAQIK KIIAVIDRAA FDITQLD