Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4373 |
Symbol | ddtA |
ID | 6966744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4049076 |
End bp | 4049987 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643388096 |
Product | tartrate dehydratase subunit alpha |
Protein accession | YP_002272534 |
Protein GI | 209396443 |
COG category | [C] Energy production and conversion |
COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0282958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGCG AAAGTAATAA GCAACAGGCA GTGAATAAGT TGACGGAGAT TGTCGCTAAC TTTACCGCCA TGATTTCTAC CCGAATGCCT GATGACGTGG TGGATAAACT AAAACAGCTA AAGGATGCCG AAACGTCGTC GATGGGGAAA ATTATCTACC ATACGATGTT CGACAACATG CAAAAAGCGA TTGACCTGAA TCGTCCTGCC TGTCAGGACA CCGGGGAGAT TATGTTCTTC GTTAAAGTCG GTTCCCGCTT CCCACTGCTT GGCGAGCTGC AAAGCATACT CAAACAAGCC GTGGAAGAGG CGACCATCAA AGCGCCGCTG CGTCACAATG CGGTAGAAAT TTTTGACGAA GTAAACACCG GCAAAAATAC CGGTAGCGGC GTACCGTGGG TCACCTGGGA TATCGTCCCC GACGGTGACG ATGCGGAAAT CGAAGTTTAC ATGGCAGGCG GCGGCTGCAC GCTACCAGGC CGCTCGAAAG TGTTAATGCC GTCAGAAGGC TACGAAGGCG TGGTGAAATT CGTCTTCGAA AATATCTCCA CCCTCGCAGT AAACGCCTGT CCACCGGTAC TGGTGGGCGT GGGCATCGCC ACCTCGGTGG AAACCGCCGC CGTACTCTCG CGTAAAGCCA TTTTGCGCCC GATTGGCAGC CGCCACCCCA ATCCAAAAGC GGCAGAGCTG GAGCTACGCC TGGAAGAAGG ACTCAACCGT CTGGGGATTG GTCCACAAGG GCTAACTGGC AACAGTTCAG TGATGGGCGT GCATATCGAA TCTGCCGCCC GCCATCCGTC AACCATCGGC GTTGCTGTTT CTACCGGTTG CTGGGCGCAT CGTCGCGGCA CACTGCTGGT TCATGCCGAT CTCACCTTTG AAAATCTGTC TCACACCCGG AGCGCGTTAT GA
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Protein sequence | MMSESNKQQA VNKLTEIVAN FTAMISTRMP DDVVDKLKQL KDAETSSMGK IIYHTMFDNM QKAIDLNRPA CQDTGEIMFF VKVGSRFPLL GELQSILKQA VEEATIKAPL RHNAVEIFDE VNTGKNTGSG VPWVTWDIVP DGDDAEIEVY MAGGGCTLPG RSKVLMPSEG YEGVVKFVFE NISTLAVNAC PPVLVGVGIA TSVETAAVLS RKAILRPIGS RHPNPKAAEL ELRLEEGLNR LGIGPQGLTG NSSVMGVHIE SAARHPSTIG VAVSTGCWAH RRGTLLVHAD LTFENLSHTR SAL
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