| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4330 |
|---|
| Symbol | parC |
|---|
| ID | 6969448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4007148 |
|---|
| End bp | 4009406 |
|---|
| Gene Length | 2259 bp |
|---|
| Protein Length | 752 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643388057 |
|---|
| Product | DNA topoisomerase IV subunit A |
|---|
| Protein accession | YP_002272495 |
|---|
| Protein GI | 209398989 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA TGGCAGAGCG CCTTGCGCTA CATGAATTTA CGGAAAACGC CTACTTAAAC
TACTCCATGT ACGTGATCAT GGACCGTGCG TTGCCGTTTA TTGGTGATGG TCTGAAACCT
GTTCAGCGCC GCATTGTGTA TGCGATGTCT GAACTGGGCC TGAATGCCAG CGCCAAATTT
AAAAAATCGG CCCGTACCGT CGGTGACGTA CTGGGTAAAT ACCATCCGCA CGGCGATAGC
GCCTGTTATG AAGCGATGGT CCTGATGGCG CAGCCGTTCT CTTACCGTTA TCCGCTGGTT
GATGGTCAGG GGAACTGGGG CGCGCCGGAC GATCCGAAAT CGTTCGCGGC AATGCGTTAC
ACCGAATCCC GGTTGTCGAA ATATTCCGAG CTGCTATTGA GCGAGTTGGG GCAGGGGACG
GCTGACTGGG TGCCAAACTT CGACGGCACT TTGCAGGAGC CGAAAATGCT ACCTGCCCGT
CTGCCAAACA TTTTGCTTAA CGGCACCACC GGTATTGCCG TCGGCATGGC GACCGATATT
CCACCGCATA ACCTGCGTGA AGTGGCTCAG GCGGCAATCG CATTAATCGA CCAGCCGAAA
ACCACGCTCG ATCAGCTGCT GGATATCGTG CAGGGGCCGG ATTATCCGAC TGAAGCGGAA
ATTATCACTT CGCGCGCCGA GATCCGTAAA ATCTACGAGA ACGGACGTGG TTCAGTGCGT
ATGCGCGCGG TGTGGAAGAA AGAAGATGGC GCGGTGGTTA TCAGCGCATT GCCGCATCAG
GTTTCAGGTG CGCGCGTACT GGAGCAAATT GCTGCGCAAA TGCGCAACAA AAAGCTGCCG
ATGGTTGACG ATCTGCGCGA TGAATCTGAC CACGAGAACC CGACCCGTCT GGTGATTGTG
CCGCGTTCCA ACCGCGTGGA TATGGATCAG GTGATGAACC ACCTCTTCGC TACCACCGAT
CTGGAAAAGA GCTATCGCAT TAACCTTAAT ATGATCGGTC TGGATGGTCG TCCGGCGGTG
AAAAACCTGC TGGAAATTCT CTCCGAATGG CTGGTGTTCC GCCGCGATAC CGTGCGCCGC
CGACTGAACT ATCGTCTGGA GAAAGTCCTC AAGCGCCTGC ATATCCTCGA AGGTTTGCTG
GTGGCGTTTC TCAATATCGA CGAAGTGATT GAGATCATTC GTAATGAAGA TGAACCGAAA
CCGGCGCTGA TGTCGCGGTT TGGCCTTACG GAAACCCAGG CGGAAGCGAT CCTCGAACTG
AAACTGCGTC ATCTTGCCAA ACTGGAAGAG ATGAAGATTC GCGGTGAGCA GAGTGAGCTG
GAAAAAGAGC GCGACCAGTT GCAGGGCATT TTGGCTTCCG AGCGTAAAAT GAATAACCTG
CTGAAGAAAG AACTGCAGGC AGACGCGCAA GCCTACGGTG ACGATCGTCG TTCGCCGTTG
CAGGAACGCG AAGAAGCGAA AGCGATGAGC GAGCACGACA TGCTGCCGTC TGAACCTGTC
ACCATTGTGC TGTCGCAGAT GGGCTGGGTA CGCAGCGCTA AAGGCCATGA TATCGACGCG
CCGGGCCTGA ATTATAAAGC GGGTGATAGC TTCAAAGCGG CGGTGAAAGG TAAGAGCAAC
CAACCGGTAG TGTTTGTTGA TTCCACCGGT CGTAGCTATG CCATTGATCC GATTACGCTG
CCGTCGGCGC GTGGTCAGGG CGAACCGCTC ACCGGCAAAT TAACGTTGCC GCCTGGGGCG
ACCGTTGACC ATATGCTGAT GGAAAGCGAC GATCAGAAAC TGCTGATGGC TTCCGATGCG
GGTTACGGTT TCGTCTGCAC CTTTAACGAT CTGGTGGCGC GTAACCGTGC AGGTAAGGCT
TTGATCACCT TACCGGAAAA TGCCCATGTT ATGCCGCCGG TGGTAATTGA AGATGCTTCC
GATATGCTGC TGGCAATCAC TCAGGCAGGC CGTATGTTGA TGTTCCCGGT AAGTGATCTG
CCGCAGCTGT CGAAGGGCAA AGGCAACAAG ATTATCAACA TTCCATCGGC AGAAGCCGCG
CGTGGCGAGG ATGGTCTGGC GCAACTGTAC GTTCTGCCGC CGCAAAGCAC GCTGACCATT
CATGTTGGGA AACGCAAAAT TAAACTGCGT CCGGAAGAGC TACAGAAAGT CACTGGCGAA
CGTGGACGCC GCGGTACGTT GATGCGCGGT TTGCAGCGTA TCGATCGTGT TGAGATCGAC
TCTCCTCGCC GTGCCAGCAG CGGTGATAGC GAAGAGTAA
|
|---|
| Protein sequence | MSDMAERLAL HEFTENAYLN YSMYVIMDRA LPFIGDGLKP VQRRIVYAMS ELGLNASAKF
KKSARTVGDV LGKYHPHGDS ACYEAMVLMA QPFSYRYPLV DGQGNWGAPD DPKSFAAMRY
TESRLSKYSE LLLSELGQGT ADWVPNFDGT LQEPKMLPAR LPNILLNGTT GIAVGMATDI
PPHNLREVAQ AAIALIDQPK TTLDQLLDIV QGPDYPTEAE IITSRAEIRK IYENGRGSVR
MRAVWKKEDG AVVISALPHQ VSGARVLEQI AAQMRNKKLP MVDDLRDESD HENPTRLVIV
PRSNRVDMDQ VMNHLFATTD LEKSYRINLN MIGLDGRPAV KNLLEILSEW LVFRRDTVRR
RLNYRLEKVL KRLHILEGLL VAFLNIDEVI EIIRNEDEPK PALMSRFGLT ETQAEAILEL
KLRHLAKLEE MKIRGEQSEL EKERDQLQGI LASERKMNNL LKKELQADAQ AYGDDRRSPL
QEREEAKAMS EHDMLPSEPV TIVLSQMGWV RSAKGHDIDA PGLNYKAGDS FKAAVKGKSN
QPVVFVDSTG RSYAIDPITL PSARGQGEPL TGKLTLPPGA TVDHMLMESD DQKLLMASDA
GYGFVCTFND LVARNRAGKA LITLPENAHV MPPVVIEDAS DMLLAITQAG RMLMFPVSDL
PQLSKGKGNK IINIPSAEAA RGEDGLAQLY VLPPQSTLTI HVGKRKIKLR PEELQKVTGE
RGRRGTLMRG LQRIDRVEID SPRRASSGDS EE
|
|---|
| |