| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4318 |
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| Symbol | metC |
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| ID | 6968159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 3995540 |
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| End bp | 3996862 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643388047 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_002272485 |
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| Protein GI | 209397938 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTTTAC GCAGTAAAAA AGTCACCAGC ACGCCATTTG CGAAAATTTT CTGCTTTATG
CCAATTCTTC AGGATGCGCC CGCGAATATT CATGCTAGTT TAGACATCCA GACGTATAAA
AACAGGAATC CCGACATGGC GGACAAAAAG CTTGATACTC AACTGGTGAA TGCAGGACGC
AGCAAAAAAT ACACTCTCGG CGCGGTAAAT AGCGTGATTC AGCGCGCTTC TTCGCTGGTA
TTTGAGAGTA TGGAAGCCAA AAAGCACGCG ACGCGCAATC GCGCCAATGG CGAGTTGTTC
TATGGACGGC GCGGAACGTT AACCCATTTT TCCTTACAAC AAGCGATGTG TGAACTGGAA
GGTGGCGCAG GCTGCGCGCT ATTTCCCTGC GGGGCGGCAG CGGTTGCTAA TTCGATTCTT
GCTTTTGTCG AACAGGGCGA TCATGTGTTG ATGACCAACA CCGCCTATGA ACCGAGTCAG
GATTTCTGTA GCAAAATCCT CAGCAAACTG GGCGTAACGA CATCGTGGTT TGATCCGCTG
ATTGGTGCCG ATATCGTTAA GCATCTGCAG CCAAACACTA AAATCGTGTT TCTGGAATCG
CCGGGTTCCA TCACTATGGA AGTCCACGAC GTTCCGGCGA TTGTTGCCGC CGTGCGCAGT
GTGGTGCCGG ATGCCATCAT TATGATCGAC AACACCTGGG CAGCCGGTGT GCTGTTTAAG
GCGCTGGATT TTGGCATCGA TGTTTCTATT CAAGCCGCCA CCAAATATCT GGTTGGGCAT
TCAGATGCGA TGATTGGCAC TGCCGTGTGC AATGCCCGTT GCTGGGAGCA GCTACGGGAA
AATGCCTATC TGATGGGCCA GATGGTCGAT GCCGATACCG CCTATATAAC CAGCCGTGGC
CTGCGCACAT TAGGTGTGCG TTTGCGTCAA CATCATGAAA GCAGTCTGAA AGTGGCCGAA
TGGCTGGCAG AACATCCGCA AGTTGCGCGA GTTAACCACC CTGCCCTGCC TGGCAGTAAA
GGACACGAAT TCTGGAAACG AGACTTTACA GGCAGCAGCG GGCTATTTTC CTTTGTGCTT
AAGAAAAAAC TCAATGATGA AGAGCTGGCG AACTATCTGG ATAACTTCAG TTTATTCAGC
ATGGCCTACT CGTGGGGCGG GTATGAATCG TTGATCCTGG CAAATCAACC AGAACATATC
GCAGCCATTC GCCCACAAGG CGAGATCGAT TTTAGCGGGA CCTTGATTCG CCTGCATATT
GGTCTGGAAG ATGTCGACGA TCTGATTGCC GATCTGGACG CCGGTTTTGC GCGGATTGTA
TAA
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| Protein sequence | MRLRSKKVTS TPFAKIFCFM PILQDAPANI HASLDIQTYK NRNPDMADKK LDTQLVNAGR
SKKYTLGAVN SVIQRASSLV FESMEAKKHA TRNRANGELF YGRRGTLTHF SLQQAMCELE
GGAGCALFPC GAAAVANSIL AFVEQGDHVL MTNTAYEPSQ DFCSKILSKL GVTTSWFDPL
IGADIVKHLQ PNTKIVFLES PGSITMEVHD VPAIVAAVRS VVPDAIIMID NTWAAGVLFK
ALDFGIDVSI QAATKYLVGH SDAMIGTAVC NARCWEQLRE NAYLMGQMVD ADTAYITSRG
LRTLGVRLRQ HHESSLKVAE WLAEHPQVAR VNHPALPGSK GHEFWKRDFT GSSGLFSFVL
KKKLNDEELA NYLDNFSLFS MAYSWGGYES LILANQPEHI AAIRPQGEID FSGTLIRLHI
GLEDVDDLIA DLDAGFARIV
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