| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4292 |
|---|
| Symbol | |
|---|
| ID | 6971324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3974258 |
|---|
| End bp | 3975796 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643388023 |
|---|
| Product | IS66 family element, transposase |
|---|
| Protein accession | YP_002272461 |
|---|
| Protein GI | 209400142 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA TCTCTTCTGA CGACATCTTC CTGCTGAAAC AGCGCCTGGC CGAACAGGAA
GCGCTGATCC ACGCCCTGCA GGAAAAGCTG AGCAACCGGG AGCGCGAAAT AGACCATCTG
CAGGCGCAGC TGGATAAACT CCGCCGGATG AACTTCGGCA GTCGTTCCGA AAAAGTCTCC
CGCCGTATCG CACAAATGGA AGCCGATCTG AACCGGCTTC AGAAAGAGAG CGATACGCTG
ACTGGTAGGG TGTATGACCC GGCAGTACAG CGTCCGTTGC GTCAGACCCG CACCCGTAAG
CCGTTCCCTG AATCACTACC CCGTGACGAA AAGCGACTGT TGCCTGCGGC GCCGTGCTGC
CCGAACTGCG GCGGTTCACT GAGCTATCTG GGCGAGGATA CCGCCGAACA GCTGGAGTTG
ATGCGTAGCG CCTTCCGGGT TATCCGGACG GTACGGGAAA AACATGCCTG TACTCAGTGC
GATGCCATCG TGCAGGCACC TGCACCTTCG CGGCCCATCG AGCGGGGTAT CGCCGGACCG
GGGCTGCTGG CCCGCGTGCT GACCTCGAAG TATGCAGAGC ACACCCCGCT GTATCGCCAG
TCAGAAATAT ACGGCCGGCA AGGTGTGGAG CTGAGGCGTT CACTGCTGTC GGGCTGGGTG
GATGCATGCT GCCGGCTGCT GTCTCCGCTG GAAGAGGCGC TTCATGGCTA TGTCATGACT
GACGGCAAAC TCCATGCCGA TGATACCCCG GTCCAGGTAC TGCTGCCGGG TAATAAGAAG
ACGAAGACCG GGCGGTTGTG GGCGTATGTT CGTGATGACC GCAATGCAGG GTCAGCGTTG
GCACCTGCAG TGTGGTTCGC TTACAGCCCG GACAGAAAAG GCATCCATCC GCAGACTCAT
CTTGCCTGCT TCAGCGGTGT GCTGCAAGCG GATGCGTACG CCGGGTTCAA CGAGCTGTAT
CGCAATGGTG GGATAACGGA AGCTGCCTGC TGGGCTCATG CCCGCCGAAA GATCCACGAT
GTGCACGTCC GCATCCCGTC AGCACTGACG GAAGAAGCCC TGGAGCAGAT CGGTCAGTTG
TACGCCATAG AGGCGGATAT AAGGGGAATG CCGGCAGAGC AGCGGCTTGC TGAACGTCAG
CGAAAAACGA AACCGTTGTT GAAATCCCTG GAAAGCTGGT TGCGTGAAAA GATGAAGACC
CTGTCGCGAC ACTCAGAGTT GGCGAAGGCG TTCGCGTACG CACTTAACCA GTGGCCGGCA
CTGACGTACT ATGCGAACGA TGGCTGGGTG GAAATCGACA ACAACATCGC TGAAAATGCC
CTGCGGGCGG TCAGTCTGGG TCGTAAAAAC TTCCTGTTCT TCGGCTCTGA TCATGGTGGT
GAGCGGGGAG CGCTACTGTA CAGCCTGATC GGGACGTGCA AACTGAATGA CGTGGATCCA
GAAAGCTACC TTCGCCATGT GCTTGGCGTC ATAGCAGACT GGCCGGTCAA CCGGGTCAGC
GAACTGCTTC CGTGGCGCAT AGCACTGCCA GCTGAATAA
|
|---|
| Protein sequence | MNDISSDDIF LLKQRLAEQE ALIHALQEKL SNREREIDHL QAQLDKLRRM NFGSRSEKVS
RRIAQMEADL NRLQKESDTL TGRVYDPAVQ RPLRQTRTRK PFPESLPRDE KRLLPAAPCC
PNCGGSLSYL GEDTAEQLEL MRSAFRVIRT VREKHACTQC DAIVQAPAPS RPIERGIAGP
GLLARVLTSK YAEHTPLYRQ SEIYGRQGVE LRRSLLSGWV DACCRLLSPL EEALHGYVMT
DGKLHADDTP VQVLLPGNKK TKTGRLWAYV RDDRNAGSAL APAVWFAYSP DRKGIHPQTH
LACFSGVLQA DAYAGFNELY RNGGITEAAC WAHARRKIHD VHVRIPSALT EEALEQIGQL
YAIEADIRGM PAEQRLAERQ RKTKPLLKSL ESWLREKMKT LSRHSELAKA FAYALNQWPA
LTYYANDGWV EIDNNIAENA LRAVSLGRKN FLFFGSDHGG ERGALLYSLI GTCKLNDVDP
ESYLRHVLGV IADWPVNRVS ELLPWRIALP AE
|
|---|
| |