| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4272 |
|---|
| Symbol | |
|---|
| ID | 6972337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3956630 |
|---|
| End bp | 3957895 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643388010 |
|---|
| Product | site-specific recombinase, phage integrase family protein |
|---|
| Protein accession | YP_002272448 |
|---|
| Protein GI | 209398968 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.451693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA CTGACGCAAA AATCCGGGCT GCAAAGCCCA CTGACAAGGC TTATAAACTC
ACTGACGGGG CTGGCATGTT CCTGCTGGTA CATCCTAATG GTTCCCGTTA CTGGCGTCTC
CGTTATCGTA TTCTGGGTAA AGAGAAGACT CTGGCACTTG TTGTGTATCC AGAAGTATCT
CTCTCCGAAG CTCGTACAAA ACGGGATGAG GCCCGAAAAC TGATTTCGGA GGGGGTTGAC
CCTTGCGAAC AGAAAAGAGC TAAAAAAGTA GTCCCTGATT TACAACTCTC TTTCGAACAT
ATTGCACGAC GCTGGCATGC CAGTAATAAA CAATGGGCAC AATCACACAG CGATAAAGTA
CTCAAAAGCC TCGAGACACA CGTATTCCCC TTTATCGGCA ATCGGGATAT CACAACACTC
AATACCCCGG ACCTGCTTAT CCCTGTTCGT GCTGCAGAAG CTAAACAAAT TTATGAAATC
GCCAGTCGTC TGCAGCAAAG AATATCTGCC GTAATGCGTT ATGCCGTACA GTCTGGCATC
ATCAGATATA ATCCTGCTCT GGATATGGCT GGCGCATTGA CTACGGTAAA ACGCCAGCAT
CGCCCCGCTC TTGATCTTTC TCGCCTGCCT GAACTTTTGT CGCGTATTGG CAGTTACAAG
GGGCAACCTG TCACCCAGCT TGCCGTTATG CTGAATTTAC TGGTTTTTAT TCGTTCCAGT
GAACTCAGAT ACGCCCGCTG GTCTGAAATT GATATTGACA ATGCCATGTG GACTATTCCA
GCCGAACGCG AACCTCTGCC AGGCGTAAAA TTCTCACACC GGGGATCCAA GATGCGAACA
CCACATCTTG TGCCACTCAG CAAACAGGTT GTAGCCATAC TGGCAGAACT TCAGACATGG
GCTGGTGAAA ATGGTCTGAT CTTTACGGGA GCACATGACC CACGTAAACC AATCAGTGAA
AACACCGTAA ATAAAGCCCT GAGGGTTATG GGGTATGACA CAACCCAGGA TGTCTGTGGT
CATGGATTCC GGGCGATGGC ATGTAGTGCG TTAATAGAAT CAGGTTTGTG GTCCCGCGAT
GCAGTTGAAC GTCAGATGAG CCATCAGGAA CGTAACGGTG TACGTGCTGC TTACATTCAT
AAAGCAGAAC ATCTGGAAGA ACGGCGACTG ATGCTACAGT GGTGGGCCGA TTTTCTGGAT
GCAAACAGAG AAAGATTTAT CAGTCCATTT GAATATGCAA AGATTAATAA TCCATTAAAA
CAGTAA
|
|---|
| Protein sequence | MALTDAKIRA AKPTDKAYKL TDGAGMFLLV HPNGSRYWRL RYRILGKEKT LALVVYPEVS
LSEARTKRDE ARKLISEGVD PCEQKRAKKV VPDLQLSFEH IARRWHASNK QWAQSHSDKV
LKSLETHVFP FIGNRDITTL NTPDLLIPVR AAEAKQIYEI ASRLQQRISA VMRYAVQSGI
IRYNPALDMA GALTTVKRQH RPALDLSRLP ELLSRIGSYK GQPVTQLAVM LNLLVFIRSS
ELRYARWSEI DIDNAMWTIP AEREPLPGVK FSHRGSKMRT PHLVPLSKQV VAILAELQTW
AGENGLIFTG AHDPRKPISE NTVNKALRVM GYDTTQDVCG HGFRAMACSA LIESGLWSRD
AVERQMSHQE RNGVRAAYIH KAEHLEERRL MLQWWADFLD ANRERFISPF EYAKINNPLK
Q
|
|---|
| |