Gene ECH74115_4270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4270 
Symbol 
ID6970707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3955544 
End bp3956251 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content52% 
IMG OID643388008 
Producthypothetical protein 
Protein accessionYP_002272447 
Protein GI209398981 
COG category[R] General function prediction only 
COG ID[COG1811] Uncharacterized membrane protein, possible Na+ channel or pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.268165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCATCG GCCCTTTTAT CAACGCAAGT GCAATATTAC TGGGTGGCAT GCTCGGTGCA 
CTGCTTAGCC AACGCTTACC GGAACGTATC CGCGTCTCCA TGACATCAAT TTTTGGTTTG
GCATCGCTGG GGATTGGTAT TTTACTGGTG GTGAAATGCG CCAACCTTCC GGCGATGGTT
TTAGCAACCT TACTCGGAGC ATTAATCGGC GAAATTTGTC TGCTGGAGAA AGGCGTCAAT
ACAGCGGTCG CCAAAGCACA AAATCTGTTT CGTCACTCAC GTAAGAAGCC AGCGCATGAA
TCTTTTATTC AGAATTATGT CGCGATTATT GTCCTGTTTT GCGCCAGCGG CACCGGGATC
TTCGGGGCGA TGAACGAAGG GATGACCGGC GATCCGAGTA TTTTAATCGC CAAGTCATTT
CTTGATTTCT TTACGGCGAT GATCTTCGCC TGCTCGCTGG GTATTGCGGT ATCGGTGATT
AGTATCCCAT TACTGATCAT CCAGTTAACG CTGGCGTGGG CTGCCGCGCT GATATTACCG
CTGACCACAC CGTCGATGAT GGCAGACTTC AGCGCCGTAG GCGGTTTATT GCTGCTGGCA
ACCGGATTAC GCATCTGTGG CATTAAAATG TTCCCGGTGG TCAACATGCT TCCAGCACTC
CTTCTGGCAA TGCCGCTTTC CGCCGCCTGG ACCGCCTGGT TTGCCTGA
 
Protein sequence
MVIGPFINAS AILLGGMLGA LLSQRLPERI RVSMTSIFGL ASLGIGILLV VKCANLPAMV 
LATLLGALIG EICLLEKGVN TAVAKAQNLF RHSRKKPAHE SFIQNYVAII VLFCASGTGI
FGAMNEGMTG DPSILIAKSF LDFFTAMIFA CSLGIAVSVI SIPLLIIQLT LAWAAALILP
LTTPSMMADF SAVGGLLLLA TGLRICGIKM FPVVNMLPAL LLAMPLSAAW TAWFA