| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4255 |
|---|
| Symbol | |
|---|
| ID | 6966732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3941723 |
|---|
| End bp | 3942289 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643387993 |
|---|
| Product | YGGT family protein |
|---|
| Protein accession | YP_002272432 |
|---|
| Protein GI | 209400119 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0762] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.809329 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.660406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGT TGACTTTCCT GCTTTCAACG GTCATTGAGC TGTATACCAT GGTGCTGTTA
TTACGCATCT GGATGCAGTG GGCTCATTGT GATTTTTACA ACCCCTTCTC ACAGTTTGTA
GTGAAGGTAA CGCAGCCAAT TATCGGGCCA CTGCGCCGCG TTATTCCGGC AATGGGACCC
ATTGATAGCG CCTCGCTGCT GGTTGCCTAT ATTCTCAGTT TTATCAAAGC CATCGTGCTG
TTTAAAGTGG TGACCTTCCT GCCAATCATC TGGATTGCCG GTTTACTGAT TCTGCTGAAA
ACCATCGGCC TGCTGATTTT CTGGGTCCTG CTGGTGATGG CGATTATGAG CTGGGTAAGC
CAGGGCCGTA GCCCGATTGA ATACGTGCTG ATTCAGCTGG CCGATCCGCT GCTGCGCCCG
ATTCGCCGCT TGCTACCGGC AATGGGGGGG ATTGATTTCT CGCCGATGAT CCTCGTTCTG
CTGCTGTATG TCATCAATAT GGGTGTCGCA GAAGTATTAC AGGCGACCGG AAATATGCTG
CTGCCGGGGC TGTGGATGGC GTTATGA
|
|---|
| Protein sequence | MNTLTFLLST VIELYTMVLL LRIWMQWAHC DFYNPFSQFV VKVTQPIIGP LRRVIPAMGP
IDSASLLVAY ILSFIKAIVL FKVVTFLPII WIAGLLILLK TIGLLIFWVL LVMAIMSWVS
QGRSPIEYVL IQLADPLLRP IRRLLPAMGG IDFSPMILVL LLYVINMGVA EVLQATGNML
LPGLWMAL
|
|---|
| |