| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4253 |
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| Symbol | |
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| ID | 6967508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3940003 |
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| End bp | 3941028 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643387991 |
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| Product | twitching motility family protein |
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| Protein accession | YP_002272430 |
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| Protein GI | 209396613 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.626068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.518101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAGGTT ATGCGCAATA TCGTTCATTT TCCGAGGATC TTAGTATGAA TATGGAAGAA
ATTGTGGCCC TTAGTGTAAA GCATAACGTC TCGGATCTAC ACCTGTGCAG CGCCTGGCCC
GCACGATGGC GCATTCGCGG GCTAATGGAA GCTGCGCCGT TTGATGCGCC GGACGTCGAA
GAGCTACTGC GGGAGTGGCT GGATGACGAT CAGCGGGCAA TATTGCTGGA GAATGGTCAG
CTGGATTTTG CCGTGTCGCT GACGGAAAAC CAGCGATTGC GTGGCAGCGC ATTCGCGCAA
CGGCATGGCA TTTCGCTGGC GTTACGGCTG TTACCTTCGC ACTGCCCGCA GCTCGAACAG
CTTGGCACAC CACCGATATT GCCGGAGTTA CTCAAGAGCG AGAATGGCTT GATTCTGGTG
ACGGGGGCGA CGGGGAGTGG CAAATCTACC ACGCTGGCGG CGATGGTTGG TTATCTCAAT
CAACATGCTG ATGCGCATAT TCTGACGCTG GAAGATCCTG TGGAATATCT CTATGCCAGC
CAGCGATGTT TGATCCAGCA GCGGGAAATC GGTTTGCATT GTATGACGTT CGCATCGGGA
TTGCGGGCCG CATTGCGGGA AGATCCTGAT GTGATTTTGC TCGGAGAGCT GCGTGACAGC
GAGACAATCC GTCTGGCGCT GACGGCGGCA GAAACCGGGC ATCTGGTGCT GGCAACCTTA
CATACACGTG GTGCCGCGCA GGCAGTTGAG CGACTTGTGG ATTCATTTCC GGCGCAGGAA
AAAGACCCCG TGCGTAATCA ACTGGCAGGT AGTTTACGGG CAGTGCTGTC ACAAAAGCTG
GAAGTGGATA AACAGGAAGG ACGCGTGGCG CTATTTGAAT TGCTGATTAA CACACCTGCG
GTGGGGAATT TGATTCGCGA AGGGAAAACC CACCAGTTAC CGCATGTTAT TCAAACTGGG
CAACAGGTGG GGATGATAAC GTTTCAGCAG AGTTATCAGC AGCGGGTGGG GGAAGGGCGT
TTGTGA
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| Protein sequence | MPGYAQYRSF SEDLSMNMEE IVALSVKHNV SDLHLCSAWP ARWRIRGLME AAPFDAPDVE
ELLREWLDDD QRAILLENGQ LDFAVSLTEN QRLRGSAFAQ RHGISLALRL LPSHCPQLEQ
LGTPPILPEL LKSENGLILV TGATGSGKST TLAAMVGYLN QHADAHILTL EDPVEYLYAS
QRCLIQQREI GLHCMTFASG LRAALREDPD VILLGELRDS ETIRLALTAA ETGHLVLATL
HTRGAAQAVE RLVDSFPAQE KDPVRNQLAG SLRAVLSQKL EVDKQEGRVA LFELLINTPA
VGNLIREGKT HQLPHVIQTG QQVGMITFQQ SYQQRVGEGR L
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