Gene ECH74115_4251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4251 
Symbol 
ID6968267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3938833 
End bp3939396 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content51% 
IMG OID643387989 
Producthypothetical protein 
Protein accessionYP_002272428 
Protein GI209397908 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.390045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.313475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAC AGCATCACTT TCTTATTGCC ATGCCTGCTC TCCAGGATCC GATTTTCCGT 
CGTTCCGTGG TCTACATTTG CGAACATAAT ACCAATGGTG CAATGGGGAT CATCGTCAAC
AAGCCGCTGG AAAATCTCAA AATTGAAGGG ATTCTGGAAA AGCTGAAGAT CACGCCGGAG
CCGCGTGATG AATCAATCCG TCTGGATAAA CCGGTTATGC TCGGCGGCCC ACTGGCTGAA
GATCGCGGGT TTATTTTGCA TACTCCGCCC TCCAATTTTG CTTCCAGCAT TCGCATTTCA
GACAACACAG TGATGACCAC TTCCCGCGAT GTGCTGGAAA CGCTCGGCAC CGATAAACAA
CCGTCTGACG TATTGGTGGC TCTGGGCTAT GCCTCCTGGG AAAAAGGTCA ACTGGAACAA
GAAATTCTCG ATAACGCGTG GCTAACCGCC CCGGCAGATC TGAATATTCT GTTCAAAACG
CCAATTGCCG ACCGCTGGCG CGAGGCGGCA AAACTGATTG GTGTGGATAT TCTCACCATG
CCTGGTGTGG CAGGACACGC CTGA
 
Protein sequence
MNLQHHFLIA MPALQDPIFR RSVVYICEHN TNGAMGIIVN KPLENLKIEG ILEKLKITPE 
PRDESIRLDK PVMLGGPLAE DRGFILHTPP SNFASSIRIS DNTVMTTSRD VLETLGTDKQ
PSDVLVALGY ASWEKGQLEQ EILDNAWLTA PADLNILFKT PIADRWREAA KLIGVDILTM
PGVAGHA