Gene ECH74115_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4249 
SymbolrsmE 
ID6967359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3937030 
End bp3937761 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID643387987 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_002272426 
Protein GI209396394 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.781388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.255618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCC CCCGCATTTA TCATCCTGAA CCACTGACCA GCCATTCTCA CATCGCGCTT 
TGCGAAGATG CCGCCAACCA TATTGGGCGC GTACTGCGTA TGGGGCCGGG ACAGGCGTTG
CAATTGTTTG ACGGCAGCAA CCAGGTCTTT GACGCCGAAA TTACCAGCGC CAGCAAAAAA
AGCGTGGAAG TGAAGGTGCT GGAAGGCCAG ATCGACGATC GCGAATCTCC GCTGCATATT
CACCTCGGTC AGGTGATGTC GCGTGGTGAA AAAATGGAAT TTACGATCCA GAAATCGATC
GAACTCGGTG TAAGCCTCAT TACGCCACTT TTTTCTGAGC GCTGCGGCGT TAAACTGGAT
AGTGAACGTC TGAACAAGAA GCTCCAGCAG TGGCAGAAGA TTGCAATTGC TGCCTGTGAG
CAGTGTGGTC GTAACCGGGT GCCGGAAATC CGTCCAGCGA TGGATCTGGA AGCCTGGTGT
GCAGAGCAGG ATGAAGGACT GAAACTGAAT CTTCACCCGC GCGCCAGTAA CAGCATCAAT
ACGTTGCCTT TACCGGTTGA ACGCGTCCGC CTGCTGATTG GCCCGGAAGG CGGTTTATCG
GCAGATGAAA TTGCCATGAC TGCCCGCTAT CAATTTACTG ATATCCTGTT GGGACCTCGC
GTTTTGCGTA CAGAGACAAC TGCGCTCACC GCCATTACCG CGCTACAAGT ACGATTTGGC
GATTTGGGCT AA
 
Protein sequence
MRIPRIYHPE PLTSHSHIAL CEDAANHIGR VLRMGPGQAL QLFDGSNQVF DAEITSASKK 
SVEVKVLEGQ IDDRESPLHI HLGQVMSRGE KMEFTIQKSI ELGVSLITPL FSERCGVKLD
SERLNKKLQQ WQKIAIAACE QCGRNRVPEI RPAMDLEAWC AEQDEGLKLN LHPRASNSIN
TLPLPVERVR LLIGPEGGLS ADEIAMTARY QFTDILLGPR VLRTETTALT AITALQVRFG
DLG