Gene ECH74115_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4248 
SymbolendA 
ID6971762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3936243 
End bp3936950 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content55% 
IMG OID643387986 
Productendonuclease I 
Protein accessionYP_002272425 
Protein GI209396449 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.260828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGTT ATTTGTCTAT TGCTGCGGTG GTACTGAGCG CAGCATTTTC CGGCCCGGCG 
TTGGCCGAAG GTATCAATAG TTTTTCTCAG GCGAAAGCCG CGGCGGTAAA AGTCCACGCT
GACGCGCCCG GTACGTTTTA TTGCGGATGT AAAATTAACT GGCAGGGCAA AAAAGGCGTT
GTCGATCTGC AATCGTGCGG CTATCAGGTG CGCAAAAATG AAAACCGCGC CAGCCGCGTA
GAGTGGGAAC ACGTCGTTCC CGCCTGGCAA TTCGGTCACC AGCGCCAGTG CTGGCAGGAC
GGTGGACGTA AAAATTGCGC CAAAGATCCG GTCTATCGCA AGATGGAAAG CGATATGCAT
AACCTGCAAC CGTCAGTCGG CGAGGTGAAT GGCGATCGCG GCAACTTTAT GTACAGCCAG
TGGAATGGCG GTGAAGGCCA GTACGGTCAA TGCGCCATGA AGGTCGATTT CAAAGAAAAA
GCTGCCGAAC CACCAGCGCG TGCACGCGGT GCCATTGCGC GCACCTACTT CTATATGCGT
GACCATTACA ACCTGACACT CTCTCGCCAG CAAACGCAGC TGTTCAACGC ATGGGACAAG
ATGTATCCGG TTACCGACTG GGAGTGCGAG CGCGATGAAC GCATCGCGAA GGTACAGGGC
AATCATAACC CGTATGTGCA ACGCGCTTGC CAGGCGCGAA AGAGCTAA
 
Protein sequence
MYRYLSIAAV VLSAAFSGPA LAEGINSFSQ AKAAAVKVHA DAPGTFYCGC KINWQGKKGV 
VDLQSCGYQV RKNENRASRV EWEHVVPAWQ FGHQRQCWQD GGRKNCAKDP VYRKMESDMH
NLQPSVGEVN GDRGNFMYSQ WNGGEGQYGQ CAMKVDFKEK AAEPPARARG AIARTYFYMR
DHYNLTLSRQ QTQLFNAWDK MYPVTDWECE RDERIAKVQG NHNPYVQRAC QARKS