| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4241 |
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| Symbol | speA |
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| ID | 6968274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3929818 |
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| End bp | 3931716 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643387979 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_002272418 |
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| Protein GI | 209398776 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCC AGGAAGCCAG CAAGATGCTG CGTACTTACA ATATTGCCTG GTGGGGCAAT
AACTACTATG ACGTTAACGA GCTGGGCCAC ATCAGCGTGT GCCCGGACCC GGACGTCCCG
GAAGCTCGCG TCGATCTCGC GCAGTTAGTG AAAACTCGTG AAGCACAGGG TCAGCGTCTG
CCTGCACTGT TCTGTTTCCC ACAGATCCTG CAGCACCGTT TGCGTTCCAT TAACGCCGCG
TTCAAACGTG CGCGGGAATC CTACGGCTAT AACGGCGATT ACTTCCTTGT TTATCCGATC
AAAGTTAACC AGCACCGTCG CGTGATTGAG TCCCTGATTC ATTCGGGCGA ACCGCTGGGT
CTGGAAGCCG GTTCCAAAGC CGAGTTGATG GCAGTGCTGG CACATGCTGG CATGACCCGT
AGCGTCATCG TCTGCAATGG TTATAAAGAC CGCGAATATA TCCGCCTGGC ATTAATTGGC
GAGAAGATGG GGCACAAGGT CTATCTGGTC ATTGAGAAGA TGTCAGAAAT CGCCATTGTG
CTGGATGAAG CAGAACGTCT GAATGTCGTT CCTCGTCTGG GCGTGCGTGC ACGTCTGGCT
TCGCAGGGCT CCGGTAAATG GCAGTCCTCC GGCGGGGAAA AATCGAAGTT CGGCCTGGCG
GCGACTCAGG TACTGCAACT GGTTGAAACC CTACGTGAAG CCGGGCGTCT CGACAGCCTG
CAACTACTGC ACTTCCACCT CGGTTCGCAG ATGGCGAATA TTCGCGATAT CGCGACAGGC
GTTCGTGAAT CCGCGCGTTT CTATGTTGAG CTGCACAAGC TGGGCGTCAA TATTCAGTGC
TTCGACGTCG GCGGCGGTCT GGGCGTGGAT TATGAAGGTA CTCGTTCGCA GTCCGACTGT
TCGGTGAACT ACGGCCTCAA TGAATATGCC AACAACATCA TCTGGGCGAT TGGTGATGCG
TGTGAAGAAA ACGGTCTGCC GCATCCGACG GTAATCACCG AATCGGGTCG TGCAGTGACT
GCGCATCACA CCGTGCTGGT GTCTAATATC ATCGGCGTGG AACGTAACGA ATACACGGTG
CCGACCGCGC CTGCAGAAGA TGCGCCGCGC GCGCTGCAAA GCATGTGGGA AACCTGGCAG
GAGATGCACG AACCGGGAAC TCGCCGTTCT CTGCGTGAAT GGTTACACGA CAGTCAGATG
GATCTGCACG ACATTCATAT CGGCTACTCT TCCGGCACCT TTAGCCTGCA AGAACGTGCA
TGGGCTGAGC AGCTTTATTT GAGCATGTGC CATGAAGTGC AAAAGCAGCT GGATCCGCAA
AACCGTGCTC ATCGTCCGAT TATCGACGAG CTGCAGGAAC GTATGGCGGA CAAAATGTAC
GTCAACTTCT CGCTGTTCCA GTCGATGCCG GATGCGTGGG GGATCGACCA GTTGTTCCCG
GTTCTGCCGC TGGAAGGGCT GGATCAAGTG CCGGAACGCC GCGCTGTGCT GCTGGATATT
ACCTGTGACT CTGACGGTGC TATCGACCAC TATATCGATG GTGATGGTAT TGCCACGACA
ATGCCTATGC CGGAGTACGA TCCAGAGAAT CCGCCGATGC TCGGTTTCTT TATGGTCGGC
GCATATCAGG AGATCCTCGG CAACATGCAC AACCTGTTCG GTGATACCGA AGCGGTTGAC
GTGTTCGTCT TCCCTGACGG TAGTGTAGAA GTGGAACTGT CTGACGAAGG CGATACCGTG
GCGGACATGC TGCAATATGT ACAGCTCGAT CCGAAAACGC TGTTAACTCA GTTCCGTGAT
CAAGTGAAGA AAACCGATCT TGATGCTGAA CTGCAACAAC AGTTCCTTGA AGAGTTCGAG
GCAGGTTTGT ACGGTTATAC CTATCTTGAA GATGAATAA
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| Protein sequence | MSSQEASKML RTYNIAWWGN NYYDVNELGH ISVCPDPDVP EARVDLAQLV KTREAQGQRL
PALFCFPQIL QHRLRSINAA FKRARESYGY NGDYFLVYPI KVNQHRRVIE SLIHSGEPLG
LEAGSKAELM AVLAHAGMTR SVIVCNGYKD REYIRLALIG EKMGHKVYLV IEKMSEIAIV
LDEAERLNVV PRLGVRARLA SQGSGKWQSS GGEKSKFGLA ATQVLQLVET LREAGRLDSL
QLLHFHLGSQ MANIRDIATG VRESARFYVE LHKLGVNIQC FDVGGGLGVD YEGTRSQSDC
SVNYGLNEYA NNIIWAIGDA CEENGLPHPT VITESGRAVT AHHTVLVSNI IGVERNEYTV
PTAPAEDAPR ALQSMWETWQ EMHEPGTRRS LREWLHDSQM DLHDIHIGYS SGTFSLQERA
WAEQLYLSMC HEVQKQLDPQ NRAHRPIIDE LQERMADKMY VNFSLFQSMP DAWGIDQLFP
VLPLEGLDQV PERRAVLLDI TCDSDGAIDH YIDGDGIATT MPMPEYDPEN PPMLGFFMVG
AYQEILGNMH NLFGDTEAVD VFVFPDGSVE VELSDEGDTV ADMLQYVQLD PKTLLTQFRD
QVKKTDLDAE LQQQFLEEFE AGLYGYTYLE DE
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