| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4239 |
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| Symbol | speB |
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| ID | 6972108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3927885 |
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| End bp | 3928805 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643387977 |
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| Product | agmatinase |
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| Protein accession | YP_002272416 |
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| Protein GI | 209396386 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACCT TAGGTCATCA ATACGATAAC TCACTGGTTT CCAACGCCTT TGGTTTTTTG
CGCCTGCCGA TGAACTTCCA GCCGTATGAC AGCGATGCTG ACTGGGTGAT TACTGGTGTG
CCGTTCGATA TGGCCACTTC TGGTCGTGCG GGGGGACGCC ACGGTCCGGC AGCTATCCGT
CAGGTTTCGA CGAATCTGGC CTGGGAACAC AACCGCTTCC CGTGGAATTT CGACATGCGT
GAGCGTCTGA ACGTCGTGGA CTGTGGTGAT CTGGTATATG CTTTCGGCGA TGCCCGTGAG
ATGAGCGAGA AGCTGCAGGC GCACGCCGAG AAGCTGCTGG CTGCCGGTAA GCGTATGCTC
TCCTTCGGTG GTGACCACTT TGTTACGCTG CCGCTGCTGC GTGCTCATGC GAAGCATTTC
GGCAAAATGG CGCTGGTACA CTTTGACGCC CACACCGATA CCTACGCGAA CGGTTGTGAA
TTTGACCACG GCACCATGTT CTATACCGCG CCGAAAGAAG GTCTGATCGA CCCGAATCAT
TCCGTGCAGA TTGGTATTCG TACCGAATTT GATAAAGACA ACGGCTTTAC CGTGCTGGAC
GCCTGCCAGG TGAACGATCG CAGCGTGGAT GACGTTATCG CCCAGGTGAA ACAAATTGTG
GGTGATATGC CGGTTTACCT GACCTTTGAT ATCGACTGCC TGGATCCTGC ATTTGCGCCG
GGAACCGGTA CGCCGGTAAT TGGCGGTCTG ACCTCCGATC GCGCTATTAA ACTGGTACGC
GGCCTGAAAG ATCTCAACAT CGTTGGGATG GACGTAGTGG AAGTGGCTCC GGCATACGAT
CAGTCGGAAA TCACCGCTCT GGCAGCGGCA ACGCTGGCGC TGGAAATGCT GTATATTCAG
GCGGCGAAAA AGGGCGAGTA A
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| Protein sequence | MSTLGHQYDN SLVSNAFGFL RLPMNFQPYD SDADWVITGV PFDMATSGRA GGRHGPAAIR
QVSTNLAWEH NRFPWNFDMR ERLNVVDCGD LVYAFGDARE MSEKLQAHAE KLLAAGKRML
SFGGDHFVTL PLLRAHAKHF GKMALVHFDA HTDTYANGCE FDHGTMFYTA PKEGLIDPNH
SVQIGIRTEF DKDNGFTVLD ACQVNDRSVD DVIAQVKQIV GDMPVYLTFD IDCLDPAFAP
GTGTPVIGGL TSDRAIKLVR GLKDLNIVGM DVVEVAPAYD QSEITALAAA TLALEMLYIQ
AAKKGE
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