Gene ECH74115_4190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4190 
Symbol 
ID6971019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3883859 
End bp3884839 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content54% 
IMG OID643387934 
Productputative global regulator 
Protein accessionYP_002272373 
Protein GI209400648 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTA CACCTTTTCC TCCCCGTCAG CCTACGGCTT CTGCCCGTTT GCCACTGACG 
CTGATGACGC TTGATGACTG GGCGCTTGCC ACCATTACTG GCGCGGACAG CGAAAAATAT
TTGCAGGGCC AGGTGACAGC AGATGTCAGC CAGATGACAG ATGATCAGCA CCTGCTCGCC
GCCCATTGCG ACGCCAAAGG TAAAATGTGG AGCAATTTAC GTCTGTTCCG CGACGGCGAT
GGCTTTGCAT GGATTGAACG GCGCAGCGTG CGTGAACCGC AGCTGGCTGA ACTGAAAAAA
TATGCGGTGT TCTCTAAAGT GACCATCGCG CCAGACGACG AGCGTGTGCT GCTTGGTGTT
GCCGGTTTTC AGGCGCGCGC CGCGCTGGCA AATATCTTTA GTGAACTGCC TTCGAAAGAA
AAACAGGTAG TTAAAGAAGG CGCGACCACT TTGCTATGGT TTGAACACCC GGCAGAACGT
TTCCTGATCG TAACCGATGA AGCTACTGCC AATATGCTGA CCGATAAACT GCGCGGTGAA
GCGGAACTGA ACAATAGCCA ACAGTGGCTG GCATTAAACA TTGAAGCGGG TTTCCCGGTG
ATTGATGCCG CGAACAGCGG GCAGTTTATC CCACAGGCGA CCAACCTCCA GGCGCTGGGC
GGTATCAGCT TTAAGAAAGG CTGCTATACC GGACAAGAGA TGGTGGCGCG AGCAAAATTC
CGTGGTGCCA ACAAACGCGC GCTCTGGTTG CTGACAGGTA GTGCCAGCCG ACTGCCGGAA
GCTGGTGAAG ACTTAGAGCT GAAAATGGGC GAGAACTGGC GTCGTACTGG TACGGTGCTG
GCTGCGGTAA AACTGGAAGA TGGTCAGGTC GTGGTGCAGG TAGTGATGAA TAACGATATG
GAACCGGACA GCATCTTCCG CGTGCGCGAC GATGCGAATA CATTGTGTAT CGAGCCACTG
CCGTATTCGC TCGAAGAGTA A
 
Protein sequence
MAFTPFPPRQ PTASARLPLT LMTLDDWALA TITGADSEKY LQGQVTADVS QMTDDQHLLA 
AHCDAKGKMW SNLRLFRDGD GFAWIERRSV REPQLAELKK YAVFSKVTIA PDDERVLLGV
AGFQARAALA NIFSELPSKE KQVVKEGATT LLWFEHPAER FLIVTDEATA NMLTDKLRGE
AELNNSQQWL ALNIEAGFPV IDAANSGQFI PQATNLQALG GISFKKGCYT GQEMVARAKF
RGANKRALWL LTGSASRLPE AGEDLELKMG ENWRRTGTVL AAVKLEDGQV VVQVVMNNDM
EPDSIFRVRD DANTLCIEPL PYSLEE