Gene ECH74115_4177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4177 
Symbol 
ID6969345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3873785 
End bp3875362 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content49% 
IMG OID643387922 
Productputative xanthine permease 
Protein accessionYP_002272361 
Protein GI209397544 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTCCGC AATTCCTGTC TCTAACTCCC CTTCCTCGCA AAAACTGGCA CTCCACGAGC 
ATGTGTTTAG ACAGTTTCAT TAACGTAAAC GGTTGCTTTT TACTCTGGCG GGCGAAAGGA
GAAACACTGA TGAGCGCCAT AGATTCCCAA CTTCCCTCAT CTTCTGGGCA AGACCGCCCA
ACTGATGAGG TTGACCGCAT ATTATCACCA GGAAAGCTGA TCATACTCGG TCTGCAACAC
GTCCTTGTCA TGTACGCAGG TGCAGTCGCT GTTCCTCTTA TGATTGGTGA CCGACTGGGC
CTCTCAAAAG AAGCTATTGC GATGCTCATT AGCTCGGATC TCTTTTGCTG CGGGATCGTC
ACATTATTGC AATGTATCGG TATCGGCCGC TTTATGGGGA TCCGCCTGCC GGTGATTATG
TCGGTGACCT TTGCTGCTGT AACACCAATG ATAGCCATTG GGATGAACCC GGATATCGGC
CTGCTGGGTA TATTTGGTGC CACTATCGCC GCGGGTTTTA TCACCACATT ATTAGCGCAA
CTTATCGGTC GCTTGATGCC TTTATTCCCG CCACTGGTTA CCGGTGTGGT TATTACTTCT
ATCGGGCTTA GCATCATTCA GGTGGGTATT GACTGGGCCG CCGGAGGTAA AGGGAATCCG
CAATATGGTA ATCCCGTTTA TTTAGGTATC TCCTTTGCCG TCTTAATTTT TATCTTGCTC
ATTACTCGCT ATGCGAAAGG ATTTATGTCC AACGTCGCCG TATTACTGGG GATTGTATTT
GGCTTTTTAC TTTCGTGGAT GATGAATGAA GTCAATTTAT CCGGGCTACA TGATGCCTCG
TGGTTTGCGA TTGTCACCCC GATGTCGTTT GGTATGCCGA TTTTCGATCC CGTTTCCATT
CTGACCATGA CTGCCGTGTT AATCATCGTG TTTATCGAGT CGATGGGGAT GTTCCTGGCA
CTGGGTGAAA TAGTCGGTCG TAAACTCTCT TCGCACGATA TTATTCGCGG GCTGCGTGTC
GATGGCGTAG GGACAATGAT TGGTGGCACG TTTAACAGCT TCCCCCACAC GTCATTTTCT
CAAAACGTTG GCCTGGTTAG CGTGACGCGC GTTCATAGCC GCTGGGTGTG TATTTCTTCG
GGAATTATAT TAATCCTGTT TGGCATGGTG CCAAAAATGG CGGTGCTGGT AGCCTCCATT
CCGCAATTTG TGCTGGGCGG CGCTGGTCTG GTGATGTTCG GCATGGTACT GGCGACAGGG
ATTCGAATTC TGTCGCGCTG TAACTACACC ACCAACCGTT ACAACCTCTA TATTGTGGCG
ATCAGTCTCG GCGTTGGCAT GACTCCAACG CTCTCTCACG ATTTCTTTTC TAAGTTACCG
GCCGTACTGC AACCGCTGCT ACATAGCGGC ATTATGCTCG CAACCCTTAG CGCCGTTGTG
CTGAACGTCT TCTTTAATGG CTATCAGCAT CATGCTGACC TGGTGAAGGA ATCCGTCTCT
GATAAAGATT TAAAAGTCAG GACAGTACGT ATGTGGCTTC TGATGCGCAA GCTGAAGAAA
AATGAGCATG GAGAATAA
 
Protein sequence
MPPQFLSLTP LPRKNWHSTS MCLDSFINVN GCFLLWRAKG ETLMSAIDSQ LPSSSGQDRP 
TDEVDRILSP GKLIILGLQH VLVMYAGAVA VPLMIGDRLG LSKEAIAMLI SSDLFCCGIV
TLLQCIGIGR FMGIRLPVIM SVTFAAVTPM IAIGMNPDIG LLGIFGATIA AGFITTLLAQ
LIGRLMPLFP PLVTGVVITS IGLSIIQVGI DWAAGGKGNP QYGNPVYLGI SFAVLIFILL
ITRYAKGFMS NVAVLLGIVF GFLLSWMMNE VNLSGLHDAS WFAIVTPMSF GMPIFDPVSI
LTMTAVLIIV FIESMGMFLA LGEIVGRKLS SHDIIRGLRV DGVGTMIGGT FNSFPHTSFS
QNVGLVSVTR VHSRWVCISS GIILILFGMV PKMAVLVASI PQFVLGGAGL VMFGMVLATG
IRILSRCNYT TNRYNLYIVA ISLGVGMTPT LSHDFFSKLP AVLQPLLHSG IMLATLSAVV
LNVFFNGYQH HADLVKESVS DKDLKVRTVR MWLLMRKLKK NEHGE