Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4162 |
Symbol | |
ID | 6969559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3851492 |
End bp | 3852703 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643387908 |
Product | peptidase |
Protein accession | YP_002272347 |
Protein GI | 209396009 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR03320] M20/DapE family protein YgeY [TIGR03526] putative selenium metabolism hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGA ATATTCCATT CAAACTGATT CTTGAAAAAG CAAAAGATTA CCAGGCGGAT ATGACTCGCT TCCTGCGCGA CATGGTTGCT ATTCCCAGTG AAAGCTGCGA CGAGAAACGG GTAGTACATC GTATTAAAGA AGAGATGGAA AAAGTCGGCT TCGATAAAGT TGAAATCGAC CCGATGGGTA ACGTTCTCGG TTATATCGGC CACGGCCCGC GTCTGGTGGC AATGGACGCT CATATCGATA CCGTCGGCAT TGGCAACATC AAAAACTGGG ACTTCGATCC GTACGAAGGC ATGGAAACTG ATGAGCTGAT CGGTGGTCGC GGTACTTCCG ACCAGGAAGG CGGCATGGCA TCTATGGTTT ATGCCGGTAA AATCATTAAA GACCTCGGTC TGGAAGATGA ATATACCCTG CTGGTTACCG GTACTGTGCA GGAAGAAGAC TGCGACGGTC TGTGCTGGCA GTACATTATT GAACAATCCG GCATTCGCCC GGAATTTGTG GTCAGTACCG AACCAACCGA CTGCCAGGTA TACCGTGGTC AGCGCGGTCG TATGGAAATT CGTATTGATG TTCAGGGTGT TAGCTGCCAC GGTTCTGCGC CAGAACGCGG TGACAACGCC ATTTTCAAAA TGGGTCCGAT TCTTGGCGAA TTACAAGAAC TCTCCCAACG TCTGGGTTAT GACGAATTCC TCGGCAAAGG CACCCTCACC GTTTCTGAAA TCTTCTTCAC ATCCCCAAGC CGTTGCGCTG TAGCAGATAG CTGCGCCGTC TCTATTGACC GCCGTCTGAC CTGGGGCGAA ACCTGGGAAG GCGCGCTGGA CGAAATCCGC GCCCTGCCTG CAGTACAGAA AGCTAACGCG GTTGTTTCTA TGTACAACTA CGACCGTCCG TCCTGGACTG GCCTGGTTTA CCCAACCGAA TGCTACTTCC CGACCTGGAA AGTGGAAGAA GATCACTTCA CCGTTAAAGC ACTGGTGAAT GCCTACGAAG GGCTGTTTGG CAAAGCGCCG GTTGTTGATA AGTGGACCTT CTCAACTAAC GGCGTATCTA TCATGGGCCG TCACGGCATT CCGGTGATCG GCTTTGGCCC GGGTAAAGAA CCTGAAGCGC ATGCACCTAA CGAAAAAACC TGGAAATCTC ACCTGGTGAC CTGTGCCGCG ATGTACGCTG CAATCCCGTT AAGCTGGCTG GCAACCGAAT AA
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Protein sequence | MAKNIPFKLI LEKAKDYQAD MTRFLRDMVA IPSESCDEKR VVHRIKEEME KVGFDKVEID PMGNVLGYIG HGPRLVAMDA HIDTVGIGNI KNWDFDPYEG METDELIGGR GTSDQEGGMA SMVYAGKIIK DLGLEDEYTL LVTGTVQEED CDGLCWQYII EQSGIRPEFV VSTEPTDCQV YRGQRGRMEI RIDVQGVSCH GSAPERGDNA IFKMGPILGE LQELSQRLGY DEFLGKGTLT VSEIFFTSPS RCAVADSCAV SIDRRLTWGE TWEGALDEIR ALPAVQKANA VVSMYNYDRP SWTGLVYPTE CYFPTWKVEE DHFTVKALVN AYEGLFGKAP VVDKWTFSTN GVSIMGRHGI PVIGFGPGKE PEAHAPNEKT WKSHLVTCAA MYAAIPLSWL ATE
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