| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4159 |
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| Symbol | |
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| ID | 6971683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3846736 |
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| End bp | 3848514 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643387905 |
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| Product | sigma-54 dependent transcriptional regulator, Fis family |
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| Protein accession | YP_002272344 |
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| Protein GI | 209400999 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.778459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTTG CTACTACGCA GTCAGTATTG ATGCAAATTC AACCGACAAT TCAGCGTTTT
GCCAGAATGC TTGCCAGCGT TTTGCAGCTT GAGGTTGAGA TCGTTGATGA AAACTTGTAT
CGCGTCGCCG GAACGGGCGC GTATGGGAAG TTTCTTGGTC GCCAGTTGAG CGGCAACTCA
CGCCTGCTCT GCCACGTCCT GGAAACGAAA ACTGAAAAAG TTGTGACACA GTCTCGCTTC
GATCCCCTTT GCGAAGGTTG CGATAGTAAA GAAAATTGCC GCGAAAAAGC ATTTCTGGGT
ACGCCTGTCA TTTTACAGGA TCGTTGTGTT GGGGTGATAA GTTTGATTGC CGTTACCCAC
GAGCAACAAG AGCATATCAG TGATAATTTA CGCGAATTTT CTGATTATGT TCGCCATATA
TCCACCATTT TTGTTTCGAA ACTTCTGGAG GATCAGGGGC CAGGAGATAA CATCAGTAAA
ATATTCGCGA CCATGATCGA TAATATGGAT CAGGGCGTAT TAGTTGTTGA TGATGAAAGT
CGGGTTCAGT TTGTTAATCA GACTGCCTTA AAAACACTTG GTGTTGTGCA AAATAATATT
ATTGGGAAAC CTATCCGTTT CAGACCATTA ACATTTGAGA GTAATTTTAC CCATGGACAT
ATGCAGCATA TTGTTTCGTG GGACGATAAA AGTGAATTAA TCATTGGTCA ATTGCATAAC
ATTCAGGGCC GACAATTATT TTTAATGGCG TTTCACCAAT CGCATACCAG TTTTTCTGTA
GCAAATGCAC CTGATGAACC GCATATTGAA CAATTGGTTG GCGAGTGCCG TGTTATGCGG
CAATTAAAAC GACTCATTAG CCGTATTGCA CCCAGCCCAT CCAGCGTTAT GGTGGTTGGT
GAAAGCGGCA CGGGTAAAGA AGTTGTCGCC CGTGCAATCC ATAAGTTGAG CGGAAGACGG
AATAAACCCT TTATTGCTAT CAACTGTGCC GCGATTCCGG AGCAGCTTCT GGAGAGCGAA
CTGTTCGGTT ATGTTAAAGG CGCATTTACT GGCGCTTCTG CCAACGGTAA AACAGGGTTG
ATTCAGGCGG CGAATACGGG CACGCTGTTT CTCGATGAAA TAGGTGATAT GCCATTAATG
TTGCAGGCTA AATTACTGCG CGCTATTGAG GCACGTGAAA TTCTGCCGAT TGGTGCCAGT
AGCCCAATAC AAGTCGACAT TCGCATCATT TCTGCAACTA ACCAGAATTT GGCCCAGTTC
ATTGCCGAAG GTAAATTCCG CGAAGATCTC TTCTACCGAC TTAATGTTAT CCCGATAACT
CTGCCACCGC TGCGTGAACG TCAGGAAGAT ATTGAACTAC TGGTGCATTA CTTTTTACAT
CTGCATACCC GTCGTCTGGG ATCGGTTTAT CCTGGCATTG CTCCCGATGT CGTCGAAATA
TTGCGTAAGC ATCGTTGGCC CGGAAACCTG CGCGAGTTAA GCAATTTGAT GGAATATCTG
GTTAACGTTG TTCCTTCAGG TGAAGTTATC GACAGCACGC TATTGCCGCC AAATCTGCTG
AATAATGGCA CAACGGAGCA AAGTGATGTA ACAGAGGTTA CTGAGGCACA CCTGTCACTC
GATGATGCGG GCGGCACGGC GCTGGAGGAG ATGGAAAAGC AAATGATCCG CGAGGCGCTT
TCACGTCATA ACAGCAAGAA GCAAGTTGCT GATGAACTGG GCATCGGCAT TGCTACGCTC
TATCGCAAGA TTAAGAAATA TGAGTTGTTA AACACATAA
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| Protein sequence | MELATTQSVL MQIQPTIQRF ARMLASVLQL EVEIVDENLY RVAGTGAYGK FLGRQLSGNS
RLLCHVLETK TEKVVTQSRF DPLCEGCDSK ENCREKAFLG TPVILQDRCV GVISLIAVTH
EQQEHISDNL REFSDYVRHI STIFVSKLLE DQGPGDNISK IFATMIDNMD QGVLVVDDES
RVQFVNQTAL KTLGVVQNNI IGKPIRFRPL TFESNFTHGH MQHIVSWDDK SELIIGQLHN
IQGRQLFLMA FHQSHTSFSV ANAPDEPHIE QLVGECRVMR QLKRLISRIA PSPSSVMVVG
ESGTGKEVVA RAIHKLSGRR NKPFIAINCA AIPEQLLESE LFGYVKGAFT GASANGKTGL
IQAANTGTLF LDEIGDMPLM LQAKLLRAIE AREILPIGAS SPIQVDIRII SATNQNLAQF
IAEGKFREDL FYRLNVIPIT LPPLRERQED IELLVHYFLH LHTRRLGSVY PGIAPDVVEI
LRKHRWPGNL RELSNLMEYL VNVVPSGEVI DSTLLPPNLL NNGTTEQSDV TEVTEAHLSL
DDAGGTALEE MEKQMIREAL SRHNSKKQVA DELGIGIATL YRKIKKYELL NT
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