| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4147 |
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| Symbol | |
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| ID | 6967062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3833628 |
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| End bp | 3835688 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643387895 |
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| Product | type III secretion protein, HrcV family |
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| Protein accession | YP_002272335 |
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| Protein GI | 209398095 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0033977 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAACA AAGTTTTGGT AGGGTTAAGG AGTCATCCAG AATTAATAAT TCTTGGATTA
ATGGTGATGA TTATCGCCAT GCTCATAATT CCATTGCCCA CCTATTTAAT CGACTTTTTG
ATTGGGCTTA ACTTAACATT GGCAATACTT GTATTTTTAG GATCATTCTA TGTTGATAGG
ATCTTAAGCT TTTCTTCATT TCCATCAATC CTCCTTATCA CAACGTTATT TCGTTTGGCG
CTGGCGATCA GTACCAGTCG ACTTATACTT CTTGAGGCGG ATGCTGGAGA AATTATAACG
AGTTTTGGTG AGTTCGTTAT TGGAGATAGC CTGGTAGTTG GTTTTGTTAT TTTCTCCATT
GTTACTATTG TTCAGTTTAT CGTGATTACT AAAGGTTCGG AACGTGTGGC TGAAGTTGCT
GCCCGCTTTT CGCTTGACGG TATGCCAGGT AAACAAATGA GCATTGACGC CGATCTACGC
GCCGGGATCA TTGATGCAGA TTTAGCAAAA GAACGTCGTA GTGTATTAGA ACGAGAGAGC
CAGTTGTATG GTTCCTTTGA TGGTGCGATG AAATTTATCA AAGGTGATGC TATTGCAAAC
ATTATTATTA TCTTTGTTAA TATTATCGGT GGGCTATCAG TAGGAGTAGG CCAAAATGGA
ATGGATTTCT CAACAGCGTT GACTGTCTAC ACAATTCTTA CTGTCGGTGA TGGTCTTGTT
TCTCAAATTC CAGCTTTATT AATTGCTATT AGCGCAGGAT TTATCGTTAC GCGCGTAAAT
GGCGATAGTG ATAATATGGG GCAAAATATA ATGTCCCAGT TATTAAGTAA TTCTTTTGTC
ATTGTTGTGA CATGTGTCCT CGCGCTAAGT ATTGGGTTGC TTCCAGGTTT TCCCCTTCTA
GTGTTTTTAT GTTTGGCAGT AATCTTAGGA ATTTACTTTT ACTTTAAATT CAAAAAGAAA
GGGACTGAAG AAACGGTTGT TGAGGGAGAT ATTACCGTTG GGTTGGAACC CTATAATCAA
GATGATGATA TCTCATTAGG TATCATTAAT AAACTTGATC AGGTTATTAC CGAAACGGTA
CCCTTGGTCT TGATTATGAA TAGTGTACAG GCTAAAAAAT ACACTGAAAT CAATCTTGCT
GATAGGATTC GTAGTCAGTT TTTTATTGAG TATGGTATCC GCATTCCCGG TATTGTCATT
CGTGAGGGGG AAGGTCTTAA TGATGAAGAT GTCATATTAA TGCTAAATGA AGTCAGAGCT
TCACAATTTA AAATTTATCA TGATCTTGTC TTGTTGGTTG AATATTCAGA TGAAGTGGTT
TCGACTTTGA TCAAGAAACC TGTCATTGTA AATAGTAATG GTGAACAATA TTATTGGGTT
ACGAAAAGTG ATGCTCAAAA ATTAACAAAA ATTGGCTGTT ATACTCGCAC GGCCATGGAT
GAAATGTATA ATCATTTATC TGTCTGTCTG GCTCATAATA TTAATGAGTA CTTTGGTATA
CAAGAAACAA AATATATTCT TGATCAATTA GAGATGAAGT ATTCTGATCT ATTAAAAGAA
ATATTAAGAT ATATAACCGT GCAGCGCATT TCAGAGGTAA TTCAGCGTCT GATCCAGGAG
CGAATTTCAG TGCGCAATAT GCGGTTAGTT ATGGAGGCCT TAGCATTATG GAGCCCACGA
GAGAAAGATA TAATCACACT CGTCGAGCAT GTACGAGGTG CATTAGGTCG CTACATTTGC
CATAAGTTTT CATATTCTGG AGAAATTAAA GCAATTGTGA TTTCGCCTGA AATAGAGGAC
AGAATCAGAG ATGGTGTCAG GCCTACCGCT GGCGGTACTT TTCTTAATCT CGATGCATCC
GAAGCTGAGA TGATTCTGGA TAATTTTAAA CTGGCACTTT CTGGAATCAA TATTCCTATT
AAAGACATTA TTTTACTGGG ATCTGTGGAT ATTCGTCGTT TTATCAAAAA ACTTATTGAA
TCTAGTTATC GAGACCTCGA AGTACTTTCG TACGGGGAAC TAACGGAAAA TGTTCCCGTT
AATATTCTGA AAACTATTTA G
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| Protein sequence | MFNKVLVGLR SHPELIILGL MVMIIAMLII PLPTYLIDFL IGLNLTLAIL VFLGSFYVDR
ILSFSSFPSI LLITTLFRLA LAISTSRLIL LEADAGEIIT SFGEFVIGDS LVVGFVIFSI
VTIVQFIVIT KGSERVAEVA ARFSLDGMPG KQMSIDADLR AGIIDADLAK ERRSVLERES
QLYGSFDGAM KFIKGDAIAN IIIIFVNIIG GLSVGVGQNG MDFSTALTVY TILTVGDGLV
SQIPALLIAI SAGFIVTRVN GDSDNMGQNI MSQLLSNSFV IVVTCVLALS IGLLPGFPLL
VFLCLAVILG IYFYFKFKKK GTEETVVEGD ITVGLEPYNQ DDDISLGIIN KLDQVITETV
PLVLIMNSVQ AKKYTEINLA DRIRSQFFIE YGIRIPGIVI REGEGLNDED VILMLNEVRA
SQFKIYHDLV LLVEYSDEVV STLIKKPVIV NSNGEQYYWV TKSDAQKLTK IGCYTRTAMD
EMYNHLSVCL AHNINEYFGI QETKYILDQL EMKYSDLLKE ILRYITVQRI SEVIQRLIQE
RISVRNMRLV MEALALWSPR EKDIITLVEH VRGALGRYIC HKFSYSGEIK AIVISPEIED
RIRDGVRPTA GGTFLNLDAS EAEMILDNFK LALSGINIPI KDIILLGSVD IRRFIKKLIE
SSYRDLEVLS YGELTENVPV NILKTI
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