Gene ECH74115_4146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4146 
Symbol 
ID6967647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3832304 
End bp3833596 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content45% 
IMG OID643387894 
ProductATP synthase SpaL 
Protein accessionYP_002272334 
Protein GI209396176 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0017873 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT TAAAATTATT AAATAAATAC AGCTACTTAC ATAGCATAAA CGGCTCTCTG 
ATTGAAGCAG AACTTGACGA CGTTTCTGTG GGTGAAGTAT GCGAAATTTA TGCGAGCAGG
CAAGCAAATG AACGTATAGC CAGGGCTCAG GTCGTTGGCT TTCGCAATGG GAAGACATTA
TTAAACCTTA TAGGCAGCTC TGTGGGGCTT ACACGTACTG CAGTTTTGAA ACCAACGGGA
GAGCAGTTAA CCATACAGAT CAGTGATGCC TTTCTTGGTT CGGTTTTGAA TGCCTCTGGT
CAAATTATGG AAAGGTTTGT CCCGGACACT CCAGGCGATA GGGGAAATTT ACGCCTGATT
GATGAACTGC CACCGTCGTA TCAGGAACGT CGAGTTATTA ATACACCACT TGAGACACGG
ATAAGAGTCA TTGATGGCGT ACTGACATGT GGCATTGGTC AACGTGTTGG GATTTTCGCC
TCGGCTGGCT GTGGCAAAAC GGTTTTAATG CATATGCTCG TAAACAATAC TGAAGCTGAT
GTGTTTGTTA TTGGCTTGAT TGGCGAACGT GGTAGGGAAG TTACGGAATG CGCGGAATCG
CTCAAAAAAT CAGTAAATGC AGCGAAATGC GTATTGGTCT ATGCCACCTC TGATTTTTCG
TCAGTAGACC GGTGTAATGC CGCCCTGATG GCGACAACCG TGGCAGAGTA TTTTCGAGAT
CGAGGAAAGA GAGTTGTACT TTTTATCGAC TCAATGACGC GGTATGCACG AGCACTACGT
GATATGAAAC TGGCAGCGGG TGAACCACCT GCCAGACGTG GTTATCCTGC TTCTGTTTTT
GACAGTTTGC CTCGCTTACT GGAGAGGCCG GGACCAACAC TAAAAGGAAG TATTACCGAG
TTTTATACCG TGTTACTGGA AGGGGAAGAT GAATCAGACC CACTGGGTGA CGAAATTCGC
TCAATCCTTG ATGGCCATAT CTATCTAAGT CGCAAACTCG CGGGTCAAGG TCACTATCCG
GCAATAGATG TTCTAAAAAG TGTGAGTCGA GTATTTGGTC AGGTCACTGA TGAAAAACAC
AGAGATAATG CTGCACGGGT AAGGAAGAAC CTCACAACTT TGGAAGATCT ACAGGTGTTT
ATTGACTTAG GGGAATATCG CGCAGGGCAA AATGCTGAAA ATGATTTTGC TATGAATGCC
CGGCCTAAAC TCACAAATTG GTTGAAACAG TCAGTTAATG AAAAAATGCC AATGAGTGAA
ACGCTAAAAG AGCTTGAACG AATTGTTAAG TAA
 
Protein sequence
MKKLKLLNKY SYLHSINGSL IEAELDDVSV GEVCEIYASR QANERIARAQ VVGFRNGKTL 
LNLIGSSVGL TRTAVLKPTG EQLTIQISDA FLGSVLNASG QIMERFVPDT PGDRGNLRLI
DELPPSYQER RVINTPLETR IRVIDGVLTC GIGQRVGIFA SAGCGKTVLM HMLVNNTEAD
VFVIGLIGER GREVTECAES LKKSVNAAKC VLVYATSDFS SVDRCNAALM ATTVAEYFRD
RGKRVVLFID SMTRYARALR DMKLAAGEPP ARRGYPASVF DSLPRLLERP GPTLKGSITE
FYTVLLEGED ESDPLGDEIR SILDGHIYLS RKLAGQGHYP AIDVLKSVSR VFGQVTDEKH
RDNAARVRKN LTTLEDLQVF IDLGEYRAGQ NAENDFAMNA RPKLTNWLKQ SVNEKMPMSE
TLKELERIVK