| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4140 |
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| Symbol | epaQ |
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| ID | 6971290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3829131 |
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| End bp | 3829391 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643387890 |
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| Product | type III secretion apparatus protein EpaQ |
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| Protein accession | YP_002272330 |
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| Protein GI | 209399840 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.000912343 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATGACA TTGTTTTTGC AGGGAATAGG GCGCTGTATC TGATTTTAGT TATGTCTGCA
GGACCTATTG CAGTAGCGAC ATTTGTTGGT TTATTGGTAG GGCTTTTTCA AACGGTAACG
CAGTTGCAAG AACAGACGTT GCCATTTGGC GTGAAATTAT TGTGCGTAAG TATTTGCTTT
TTTTTAATGA GCGGATGGTA TGGTGAAAAA TTATATTCTT TTGGTATTGA AATGCTGAAT
TTAGCATTTG CGAGAGGATA G
|
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| Protein sequence | MDDIVFAGNR ALYLILVMSA GPIAVATFVG LLVGLFQTVT QLQEQTLPFG VKLLCVSICF
FLMSGWYGEK LYSFGIEMLN LAFARG
|
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