| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4107 |
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| Symbol | lysA |
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| ID | 6969884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3804435 |
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| End bp | 3805697 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643387862 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002272302 |
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| Protein GI | 209399305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.475873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000027959 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACATT CACTGTTCAG CACCGATACC GATCTCACCG CCGAAAATCT GCTGCGTTTG
CCCGCTGAAT TTGGCTGCCC GGTGTGGGTC TACGATGCGC AAATTATTCG TCGGCAGATT
GCAGCGCTGA AACAGTTTGA TGTGGTGCGC TTTGCACAGA AAGCCTGTTC CAATATTCAT
ATTTTGCGCT TAATGCGTGA GCAGGGCGTG AAAGTGGATT CCGTCTCGTT AGGCGAAATA
GAGCGTGCGT TGGCGGCGGG TTACAATCCG CAAACGCACC CCGATGATAT TGTTTTTACG
GCAGATGTTA TCGATCAGGC GACGCTTGAA CGCGTCAGTG AATTGCAAAT TCCGGTGAAT
GCGGGTTCTG TTGATATGTT CGACCAACTG GGCCAGGTTT CGCCAGGGCA TCGGGTATGG
CTGCGCGTTA ATCCGGGGTT TGGTCACGGA CATAGCCAAA AAACCAATAC CGGTGGCGAA
AACAGCAAGC ACGGTATCTG GTACACCGAT CTGCCCGCCG CACTGGACGT GATACAACGT
CATCATCTGC AGCTGGTCGG CATTCACATG CACATTGGTT CTGGCGTTGA TTATGCCCAT
CTGGAACAGG TGTGTGGTGC TATGGTGCGT CAGGTCATCG AATTCGGTCA GGATTTACAG
GCTATTTCTG CGGGCGGTGG GCTTTCTATT CCTTATCAAC AGGGTGAAGA GGCGGTTGAT
ACCGAACATT ATTATGGTCT GTGGAATGCC GCGCGTGAGC AAATCGCCCG CCATTTGGGC
CACCCTGTGA AACTGGAAAT TGAACCGGGT CGCTTCCTGG TAGCGCAGTC TGGCGTGTTA
ATTACTCAGG TGCGGAGCGT CAAACAAATG GGTAGCCGCC ACTTTGTGCT GGTTGATGCC
GGGTTTAACG ATCTGATGCG CCCGGCAATG TACGGTAGTT ACCACCATAT CAGTGCCCTG
GCAGCTGATG GTCGTTCTCT GGAACACGCA CCAACGGTGG AAACCGTCGT CGCCGGACCG
TTATGTGAAT CGGGCGATGT CTTTACCCAG CAGGAAGGGG GAAATGTTGA ACCCCGCGCC
TTGCCGGAAG TGAAGGCAGG TGATTATCTG GTACTGCATG ATACAGGGGC ATATGGCGCA
TCAATGTCAT CCAACTACAA TAGCCGTCCG CTGTTACCAG AAGTTCTGTT TGATAATGGT
CAGGCGCGGT TGATTCGCCG TCGCCAGACC ATCGAAGAAT TACTGGCGCT GGAATTGCTT
TAA
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| Protein sequence | MPHSLFSTDT DLTAENLLRL PAEFGCPVWV YDAQIIRRQI AALKQFDVVR FAQKACSNIH
ILRLMREQGV KVDSVSLGEI ERALAAGYNP QTHPDDIVFT ADVIDQATLE RVSELQIPVN
AGSVDMFDQL GQVSPGHRVW LRVNPGFGHG HSQKTNTGGE NSKHGIWYTD LPAALDVIQR
HHLQLVGIHM HIGSGVDYAH LEQVCGAMVR QVIEFGQDLQ AISAGGGLSI PYQQGEEAVD
TEHYYGLWNA AREQIARHLG HPVKLEIEPG RFLVAQSGVL ITQVRSVKQM GSRHFVLVDA
GFNDLMRPAM YGSYHHISAL AADGRSLEHA PTVETVVAGP LCESGDVFTQ QEGGNVEPRA
LPEVKAGDYL VLHDTGAYGA SMSSNYNSRP LLPEVLFDNG QARLIRRRQT IEELLALELL
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