Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4087 |
Symbol | recC |
ID | 6968678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3785857 |
End bp | 3789225 |
Gene Length | 3369 bp |
Protein Length | 1122 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643387845 |
Product | exonuclease V subunit gamma |
Protein accession | YP_002272285 |
Protein GI | 209396729 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.459792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGGG TCTACCATTC CAATCGTCTG GACGTGCTGG AAGCGTTGAT GGAGTTTATT GTCGAACGCG AACGGCTGGA CGATCCTTTC GAACCAGAGA TGATTCTGGT GCAAAGTACC GGTATGGCAC AGTGGCTGCA AATGACCCTG TCGCAAAAGT TTGGTATTGC GGCAAACATT GATTTTCCGC TGCCTGCGAG CTTTATCTGG GATATGTTCG TCCGGGTGTT ACCGGAGATC CCCAAAGAGA GCGCCTTTAA CAAACAGAGC ATGAGCTGGA AACTGATGAC TCTGCTGCCG CAATTGCTGG AGCGCGAAGA CTTTACCCTG TTGCGGCATT ATCTGACTGA CGATAGCGAC AAGCGAAAGC TGTTCCAGCT TTCCTCAAAA GCGGCGGACC TGTTTGACCA GTATCTGGTC TATCGTCCGG ACTGGCTGGC ACAGTGGGAA ACAGGACATT TGGTTGAAGG GCTGGGAGAG GCACAGGCCT GGCAAGCGCC GTTGTGGAAG GCGCTGGTGG AATATACCCA TGAACTCGGA CAACCGCGCT GGCACCGCGC CAATCTCTAT CAGCGCTTTA TCGAAACGCT GGAGTCCGCG ACGACCTGCC CGCCGGGGTT ACCTTCGCGC GTCTTTATAT GCGGTATTTC CGCGTTACCG CCTGTTTATC TCCAGGCGCT CCAGGCGCTG GGTAAACATA TTGAAATCCA TCTCCTGTTT ACCAACCCCT GCCGTTATTA CTGGGGCGAC ATTAAAGATC CTGCTTATCT GGCGAAACTA CTGACTCGCC AGCGCCGACA CAGTTTTGAA GATCGCGAAT TACCGCTATT TCGCGACAGC GAAAATGCCG GGCAGCTCTT TAACAGCGAT GGTGAACAGG ATGTCGGCAA CCCGCTGCTG GCCTCATGGG GCAAGCTTGG GCGCGACTAC ATTTATCTCC TTTCTGACCT GGAGAGCAGC CAGGAGCTGG ACGCCTTTGT CGATGTGACG CCAGATAACC TGCTGCATAA CATTCAGTCT GACATTCTGG AACTGGAAAA CCGCGCCGTT GCTGGTGTGA ACATCGAAGA GTTTTCCCGT AGCGATAACA AACGTCCGCT TGATCCACTG GATAGCAGTA TCACCTTCCA CGTTTGCCAT AGCCCGCAGC GTGAAGTTGA AGTTTTACAC GATCGCCTGC TGGCGATGCT GGAAGAAGAC CCGACACTTA CTCCGCGCGA CATCATCGTG ATGGTGGCTG ATATCGACAG CTACAGTCCG TTTATTCAGG CTGTGTTTGG TAGCGCACCT GCGGATCGTT ACCTGCCTTA CGCCATTTCC GACCGTCGGG CGCGGCAGTC GCATCCTGTA CTTGAAGCGT TTATCAGCCT GTTATCGTTG CCAGACAGCC GCTTTGTGTC GGAAGACGTG CTGGCATTAC TGGATGTGCC GGTGCTGGCG GCGCGGTTTG ACATCACCGA AGAAGGGCTG CGTTATTTAC GTCAGTGGGT CAACGAATCC GGCATTCGTT GGGGGATAGA TGACGACAAC GTTCGCGAGC TGGAACTCCC CGCCACCGGA CAACACACCT GGCGATTTGG CCTGACGCGT ATGTTGTTGG GCTACGCGAT GGAGAGCGCG CAGGGCGAGT GGCAATCGGT TCTACCTTAT GATGAATCGA GCGGCTTAAT TGCAGAACTG GTGGGGCATC TGGCTTCACT GCTAATGCAG CTAAACATCT GGCGTCGCGG GCTGGCACAG GAGCGTCCGC TGGAAGAGTG GTTGCCGGTT TGTCGCGATA TGCTCAACGC CCTCTTCCTG CCGGATGCGG AAACCGAAGC GGCGATGACG CTGATCGAAC AACAATGGCA GGCGATTATC GCCGAAGGTT TAGGTGCGCA GTATGGCGAT GCGGTGCCGC TGTCACTATT GCGTGATGAA CTGGCACAGC GCCTGGATCA AGAACGTATC AGCCAGCGTT TTCTCGCCGG GCCGGTTAAC ATTTGTACTC TGATGCCAAT GCGTTCAATT CCGTTCAAAG TGGTTTGCCT GCTGGGAATG AACGACGGCG TTTATCCACG TCAGCTTGCG CCATTGGGCT TTGACCTGAT GAGCCAGAAA CCGAAGCGTG GCGACCGTAG CCGTCGCGAT GACGACCGCT ACCTGTTCCT GGAAGCGTTA ATTTCCGCGC AGCAAAAACT CTATATCAGC TATATCGGGC GTTCCATTCA GGATAACAGT GAACGTTTCC CGTCGGTACT GGTGCAGGAA CTGATCGACT ACATCGGGCA AAGTCATTAT CTACCGGGCG ATGAAGCGCT CAACTGTGAT GAAAGCGAGG CAAGGGTAAA AGCGCATCTT ACTTGCCTCC ATACCCGGAT GCCGTTTGAT CCGCAAAACT ACCAGCCAGG CGAACGACAA AGCTATGCTC GTGAATGGCT ACCTGCGGCC AGCCAGGCTG GTAAAGCACA TTCTGAATTT GTTCAGCCGC TGCCGTTTAC CTTACCGGAA ACCGTGCCGC TGGAAACGCT ACAACGATTC TGGGCACATC CGGTGCGGGC GTTCTTCCAG ATGCGTTTGC AGGTGAACTT CCGTACTGAA GACAGCGAAA TCCCCGACAC CGAGCCATTT ATTCTGGAAG GACTTAGCCG TTATCAAATC AATCAGCAGT TATTGAATGC ACTGGTTGAG CAGGATGATG CCGAACGCTT GTTCCGCCGC TTCCGGGCGG CAGGGGATTT ACCGTATGGC GCTTTTGGTG AAATTTTCTG GGAAACACAG TGCCAGGAGA TGCAGCAGCT TGCCGACAGA GTCATTGCCT GTCGCCAGCC GGGGCAGAGT ATGGAAATTG ATCTCGCTTG CAACGGTGTG CAGATAACTG GCTGGTTGCC GCAGGTGCAG CCGGATGGCT TGTTGCGCTG GCGTCCCTCT TTATTAAGTG TGGCGCAGGG AATGCAACTT TGGCTGGAAC ACCTTGTCTA CTGTGCCAGC GGTGGTAATG GTGAAAGTCG CCTTTTTCTA CGCAAAGACG GCGAGTGGCG TTTTCCGCCG CTTGCAGCCG AACAGGCTTT GCATTACCTC TCACAACTGA TTGAGGGGTA TCGTGAAGGG ATGTCCGCGC CATTGCTGGT GTTACCTGAA AGTGGCGGCG CGTGGCTAAA AACCTGTTAT GACGCGCAAA ACGATGCCAT GCTGGATGAC GATTCCACGT TGCAAAAAGC CCGTACGAAA TTCCTTCAGG CTTACGAAGG CAACATGATG GTGAGTGGCG AAGGTGATGA TATCTGGTAT CAAAGGCTCT GGCGGCAATT AACACCAGAG ACAATGGAGG CAATCGTTGA ACAGTCGCAA CGTTTCCTGT TACCGCTGTT TCGCTTTAAT CAGTCATGA
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Protein sequence | MLRVYHSNRL DVLEALMEFI VERERLDDPF EPEMILVQST GMAQWLQMTL SQKFGIAANI DFPLPASFIW DMFVRVLPEI PKESAFNKQS MSWKLMTLLP QLLEREDFTL LRHYLTDDSD KRKLFQLSSK AADLFDQYLV YRPDWLAQWE TGHLVEGLGE AQAWQAPLWK ALVEYTHELG QPRWHRANLY QRFIETLESA TTCPPGLPSR VFICGISALP PVYLQALQAL GKHIEIHLLF TNPCRYYWGD IKDPAYLAKL LTRQRRHSFE DRELPLFRDS ENAGQLFNSD GEQDVGNPLL ASWGKLGRDY IYLLSDLESS QELDAFVDVT PDNLLHNIQS DILELENRAV AGVNIEEFSR SDNKRPLDPL DSSITFHVCH SPQREVEVLH DRLLAMLEED PTLTPRDIIV MVADIDSYSP FIQAVFGSAP ADRYLPYAIS DRRARQSHPV LEAFISLLSL PDSRFVSEDV LALLDVPVLA ARFDITEEGL RYLRQWVNES GIRWGIDDDN VRELELPATG QHTWRFGLTR MLLGYAMESA QGEWQSVLPY DESSGLIAEL VGHLASLLMQ LNIWRRGLAQ ERPLEEWLPV CRDMLNALFL PDAETEAAMT LIEQQWQAII AEGLGAQYGD AVPLSLLRDE LAQRLDQERI SQRFLAGPVN ICTLMPMRSI PFKVVCLLGM NDGVYPRQLA PLGFDLMSQK PKRGDRSRRD DDRYLFLEAL ISAQQKLYIS YIGRSIQDNS ERFPSVLVQE LIDYIGQSHY LPGDEALNCD ESEARVKAHL TCLHTRMPFD PQNYQPGERQ SYAREWLPAA SQAGKAHSEF VQPLPFTLPE TVPLETLQRF WAHPVRAFFQ MRLQVNFRTE DSEIPDTEPF ILEGLSRYQI NQQLLNALVE QDDAERLFRR FRAAGDLPYG AFGEIFWETQ CQEMQQLADR VIACRQPGQS MEIDLACNGV QITGWLPQVQ PDGLLRWRPS LLSVAQGMQL WLEHLVYCAS GGNGESRLFL RKDGEWRFPP LAAEQALHYL SQLIEGYREG MSAPLLVLPE SGGAWLKTCY DAQNDAMLDD DSTLQKARTK FLQAYEGNMM VSGEGDDIWY QRLWRQLTPE TMEAIVEQSQ RFLLPLFRFN QS
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