| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4084 |
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| Symbol | recD |
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| ID | 6970517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3777432 |
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| End bp | 3779258 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643387842 |
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| Product | exonuclease V subunit alpha |
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| Protein accession | YP_002272282 |
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| Protein GI | 209397729 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGC AAAAGCAATT ACTGGAAGCT GTGGAGCACA AACAGCTACG CCCGCTGGAC
GTGCAGTTTG CCCTGACCGT GGCGGGAGAT GAACATCCTG CCGTCACCCT CGCGGCGGCA
CTGTTAAGTC ATGATGCCGG AGAGGGGCAC GTTTGTTTGC CGCTTTCACG ACTGGAAAAT
AATGAGGAGT CGCATCCGCT GTTGGCGACC TGTGTCAGTG AAATCGGTGA GCTACAAAAT
TGGGAAGAAT GCTTGCTGGC TTCACAAGCG GTCAGCCGGG GAGATGAACC CACGCCGATG
ATCCTCTGTG GCGATCGTCT TTATTTGAAT CGCATGTGGT GTAACGAGCG GACGGTAGCG
CGCTTCTTCA ATGAGGTGAA TCATGCCATC GAGGTGGATG AAGCCTTGTT GGCGCAAACC
CTGGATAAAC TCTTTCCGAC TGGTGATGAA ATTAACTGGC AAAAAGTGGC GGCAGCAGTG
GCGCTGACGC GGCGGATCTC GGTGATTTCC GGCGGCCCTG GCACCGGTAA AACGACCACC
GTAGCGAAGT TGCTGGCAGC GTTAATTCAA ATGGCCGACG GCGAACGCTG CCGTATCCGT
CTGGCTGCAC CAACGGGTAA AGCTGCCGCG CGCTTAACCG AATCTCTCGG CAAGGCTTTG
CGACAGTTAC CGCTGACCGA TGAACAAAAG AAACGTATTC CGGAAGATGC CAGTACTTTG
CACCGATTGC TGGGTGCGCA GCCGGGTAGC CAGCGTTTAC GTCATCATGC CGGTAACCCG
CTGCATCTTG ATGTGCTGGT GGTAGATGAA GCGTCAATGA TCGATCTGCC TATGATGTCG
AGACTGATCG ACGCCTTGCC CGATCATGCG CGAGTGATCT TTCTCGGCGA TCGTGATCAA
CTGGCCTCGG TTGAGGCTGG GGCTGTGCTG GGCGATATCT GCGCTTATGC CAATGCCGGC
TTTACCGCCG AGCGTGCCGG GCAGCTAAGC CGCCTGACGG GAACTCACGT TCCGGCAGGA
ACTGGCACAG AAGCGGCATC TTTGCGCGAC AGTCTCTGCC TGCTGCAAAA AAGCTATCGT
TTCGGCAGCG ATTCTGGCAT TGGTCAGTTA GCTGCGGCGA TCAACCGTGG TGATAAAACG
GCAGTGAAAA CCGTTTTTCA GCAGGATTTT ACTGATATTG AAAAACGGCT TTTACAGAGC
GGCGAAGATT ATATTGCGAT GCTTGAGGAA GCTCTTGCGG GTTATGGACG TTATCTGGAT
CTGCTGCAAG CGCGTGCCGA GCCGGATTTA ATCATTCAGG CGTTCAATGA GTACCAACTT
TTGTGCGCCC TGCGGGAAGG GCCATTTGGC GTGGCTGGAC TGAATGAGCG AATTGAGCAG
TTTATGCAAC AGAAGCGCAA AATTCATCGT AATCCGCACT CTCGTTGGTA CGAAGGCCGA
CCGGTGATGA TTGCCCGTAA TGACAGCGCG CTTGGGTTGT TTAATGGCGA TATCGGTATT
GCGCTGGATC GCGGGCAGGG GACGCGCGTC TGGTTTGCGA TGCCGGACGG CAATATTAAG
TCTGTGCAAC CGAGTCGCTT GCCAGAGCAC GAAACTACGT GGGCGATGAC GGTACATAAA
TCGCAGGGAT CGGAGTTCGA CCATGCGGCG TTGATTTTAC CGAGCCAACG CACGCCGGTA
GTAACGCGAG AGCTGGTTTA TACCGCGGTG ACCCGCGCGC GTCGCCGTCT GTCGCTGTAT
GCCGATGAGC GCATATTAAG TGCGGCAATC GCCACTCGTA CTGAGCGGCG CAGTGGTCTG
GCGGCGTTGT TTAGTTCACG GGAATAA
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| Protein sequence | MKLQKQLLEA VEHKQLRPLD VQFALTVAGD EHPAVTLAAA LLSHDAGEGH VCLPLSRLEN
NEESHPLLAT CVSEIGELQN WEECLLASQA VSRGDEPTPM ILCGDRLYLN RMWCNERTVA
RFFNEVNHAI EVDEALLAQT LDKLFPTGDE INWQKVAAAV ALTRRISVIS GGPGTGKTTT
VAKLLAALIQ MADGERCRIR LAAPTGKAAA RLTESLGKAL RQLPLTDEQK KRIPEDASTL
HRLLGAQPGS QRLRHHAGNP LHLDVLVVDE ASMIDLPMMS RLIDALPDHA RVIFLGDRDQ
LASVEAGAVL GDICAYANAG FTAERAGQLS RLTGTHVPAG TGTEAASLRD SLCLLQKSYR
FGSDSGIGQL AAAINRGDKT AVKTVFQQDF TDIEKRLLQS GEDYIAMLEE ALAGYGRYLD
LLQARAEPDL IIQAFNEYQL LCALREGPFG VAGLNERIEQ FMQQKRKIHR NPHSRWYEGR
PVMIARNDSA LGLFNGDIGI ALDRGQGTRV WFAMPDGNIK SVQPSRLPEH ETTWAMTVHK
SQGSEFDHAA LILPSQRTPV VTRELVYTAV TRARRRLSLY ADERILSAAI ATRTERRSGL
AALFSSRE
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