| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4082 |
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| Symbol | amiC |
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| ID | 6972414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3774554 |
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| End bp | 3775807 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643387840 |
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| Product | N-acetylmuramoyl-L-alanine amidase AmiC |
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| Protein accession | YP_002272280 |
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| Protein GI | 209398948 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.354645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGAT CCAACACTGC AATCAGCCGT CGTCGTTTAC TGCAAGGCGC GGGTGCCATG
TGGCTATTGA GCGTAAGTCA GGTCAGTCTG GCTGCGGTCA GCCAGGTCGT GGCGGTGCGC
GTCTGGCCTG CGTCCAGCTA CACCCGCGTG ACGGTAGAAT CAAATCGTCA GCTGAAATAT
AAGCAGTTCG CGTTGAGTAA CCCGGAACGC GTGGTGGTGG ATATCGAAGA TGTAAACCTG
AACTCGGTAC TCAAGGGGAT GGCGGCACAA ATTCGTGCAG ACGACCCGTT CATCAAGTCG
GCGCGCGTCG GGCAATTTGA CCCGCAAACC GTACGGATGG TTTTTGAATT AAAGCAAAAC
GTAAAACCGC AGCTGTTTGC CCTTGCGCCG GTCGCCGGGT TTAAAGAGCG TCTGGTGATG
GACCTCTATC CGGCCAATGC ACAGGATATG CAGGACCCGC TGCTGGCGCT GCTGGAGGAT
TACAACAAAG GCGACCTCGA AAAGCAGGTG CCGCCAGCGC AAAGTGGTCC ACAACCAGGT
AAAGCAGGGC GCGATCGTCC GATTGTCATT ATGCTTGACC CTGGCCACGG TGGCGAAGAC
TCCGGTGCGG TGGGGAAATA CAAAACGCGC GAAAAAGATG TGGTATTGCA AATAGCTCGC
CGTTTGCGCT CTCTGATCGA GAAAGAGGGC AATATGAAGG TGTACATGAC GCGCAATGAA
GACATCTTCA TTCCGTTGCA AGTGCGCGTA GCAAAAGCTC AGAAACAGCG TGCTGACCTG
TTTGTCTCTA TCCATGCCGA CGCCTTTACC AGTCGCCAGC CGAGCGGTTC CTCGGTGTTT
GCGCTCTCAA CCAAAGGTGC AACCAGTACT GCGGCAAAAT ATCTGGCACA AACCCAGAAC
GCCTCCGACT TGATTGGTGG CGTGAGCAAA AGCGGTGACC GCTATGTCGA CCACACCATG
TTCGATATGG TGCAGTCGCT GACCATTGCT GACAGCCTTA AGTTTGGTAA AGCGGTGCTG
AATAAGCTCG GTAAAATCAA CAAGCTGCAT AAAAATCAAG TTGAACAGGC CGGGTTTGCC
GTACTAAAGG CACCAGATAT TCCCTCCATT CTGGTCGAAA CGGCGTTTAT CAGTAACGTT
GAGGAAGAGC GTAAACTGAA AACGGCGACC TTCCAGCAGG AAGTTGCGGA GTCTATTCTT
GCGGGAATTA AAGCGTATTT TGCCGATGGG GCGACCCTGG CGAGAAGGGG ATGA
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| Protein sequence | MSGSNTAISR RRLLQGAGAM WLLSVSQVSL AAVSQVVAVR VWPASSYTRV TVESNRQLKY
KQFALSNPER VVVDIEDVNL NSVLKGMAAQ IRADDPFIKS ARVGQFDPQT VRMVFELKQN
VKPQLFALAP VAGFKERLVM DLYPANAQDM QDPLLALLED YNKGDLEKQV PPAQSGPQPG
KAGRDRPIVI MLDPGHGGED SGAVGKYKTR EKDVVLQIAR RLRSLIEKEG NMKVYMTRNE
DIFIPLQVRV AKAQKQRADL FVSIHADAFT SRQPSGSSVF ALSTKGATST AAKYLAQTQN
ASDLIGGVSK SGDRYVDHTM FDMVQSLTIA DSLKFGKAVL NKLGKINKLH KNQVEQAGFA
VLKAPDIPSI LVETAFISNV EEERKLKTAT FQQEVAESIL AGIKAYFADG ATLARRG
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