| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4076 |
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| Symbol | csdE |
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| ID | 6968974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 3771339 |
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| End bp | 3771782 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643387834 |
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| Product | cysteine desulfuration protein CsdE |
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| Protein accession | YP_002272277 |
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| Protein GI | 209395840 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2166] SufE protein probably involved in Fe-S center assembly |
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| TIGRFAM ID | [TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0951499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAACC CGCAATTCGC CGGACATCCG TTCGGCACAA CCGTAACCGC AGAAACGTTA
CGCAATACCT TCGCACCGTT GACGCAATGG GAAGATAAAT ATCGCCAGTT GATCATGCTG
GGGAAACAGC TTCCGGCTTT GCCAGACGAG TTAAAAGCGC AGGCTAAAGA GATTGCCGGA
TGCGAAAACC GCGTCTGGCT GGGATATACC GTGGCTGAAA ACGGTAAAAT GCACTTCTTT
GGCGACAGCG AAGGACGTAT AGTGCGCGGC CTCCTGGCGG TGCTGTTGAC TGCCGTTGAG
GGGAAAACCG CCGCCGAATT GCAGGCACAG TCGCCGCTGG CATTGTTTGA TGAGCTGGGA
TTGCGTGCGC AACTTAGCGC CTCACGCAGC CAGGGGTTAA ATGCGTTAAG CGAGGCGATT
ATCGCTGCGA CGAAGCAGGT TTAA
|
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| Protein sequence | MTNPQFAGHP FGTTVTAETL RNTFAPLTQW EDKYRQLIML GKQLPALPDE LKAQAKEIAG
CENRVWLGYT VAENGKMHFF GDSEGRIVRG LLAVLLTAVE GKTAAELQAQ SPLALFDELG
LRAQLSASRS QGLNALSEAI IAATKQV
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