Gene ECH74115_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4060 
Symbol 
ID6970301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3755026 
End bp3756315 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content52% 
IMG OID643387819 
Productserine transporter family protein 
Protein accessionYP_002272262 
Protein GI209397478 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0533017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA CTCAAACCAG CACGATTGCG TCGAAAGACT CTCGTAGTGC CTGGCGCAAG 
ACAGACACCA TGTGGATGCT GGGCCTTTAC GGCACGGCAA TCGGCGCGGG CGTGCTGTTC
CTGCCAATCA ACGCCGGTGT TGGCGGTATG ATCCCGCTGA TCATCATGGC TATCCTTGCG
TTCCCGATGA CGTTTTTTGC TCACCGCGGC CTGACTCGCT TCGTACTGTC TGGTAAAAAC
CCGGGCGAAG ACATTACCGA GGTTGTAGAA GAACACTTTG GTATTGGCGC AGGTAAACTG
ATTACCCTGC TCTACTTCTT CGCTATCTAC CCGATCCTGC TGGTTTATAG CGTGGCAATC
ACCAATACAG TTGAAAGCTT CATGTCTCAC CAGCTGGGTA TGACACCACC GCCGCGTGCG
ATTCTGTCGC TGATCCTGAT CGTGGGTATG ATGACCATCG TTCGCTTTGG TGAACAGATG
ATCGTTAAAG CGATGAGTAT TCTGGTATTC CCGTTTGTTG GCGTACTGAT GCTGCTGGCT
CTGTACCTGA TCCCGCAGTG GAACGGCGCA GCACTGGAAA CGCTGTCTCT GGACACTGCA
TCTGCAACCG GAAACGGTCT GTGGATGACC CTGTGGCTGG CAATTCCGGT AATGGTGTTC
TCGTTCAACC ACTCTCCGAT CATCTCTTCT TTCGCCGTTG CGAAGCGTGA AGAGTACGGC
GATATGGCAG AACAGAAATG CTCGAAGATC CTGGCATTCG CACACATCAT GATGGTGCTG
ACCGTAATGT TCTTCGTCTT CAGCTGCGTA CTGAGCCTGA CTCCGGCAGA CCTGGCTGCG
GCTAAAGAGC AGAACATCTC GATTCTGTCT TACCTGGCTA ACCACTTTAA CGCACCGGTT
ATCGCGTGGA TGGCTCCGAT TATCGCGATT ATCGCTATCA CCAAATCCTT CCTCGGCCAC
TACCTGGGCG CACGTGAAGG CTTCAACGGT ATGGTGATTA AATCTCTGCG TGGTAAAGGT
AAGTCTATCG AAATCAACAA GCTGAACCGT ATCACTGCGC TGTTCATGCT GGTAACGACC
TGGATTGTTG CCACCCTGAA CCCGAGCATC CTGGGTATGA TTGAAACCCT GGGCGGCCCA
ATCATCGCGA TGATCCTGTT CCTGATGCCG ATGTACGCAA TTCAGAAAGT ACCGGCAATG
CGTAAGTACA GCGGTCACAT CAGCAACGTA TTCGTTGTCG TGATGGGTCT GATTGCAATC
TCCGCAATCT TCTACTCTCT GTTCAGCTAA
 
Protein sequence
METTQTSTIA SKDSRSAWRK TDTMWMLGLY GTAIGAGVLF LPINAGVGGM IPLIIMAILA 
FPMTFFAHRG LTRFVLSGKN PGEDITEVVE EHFGIGAGKL ITLLYFFAIY PILLVYSVAI
TNTVESFMSH QLGMTPPPRA ILSLILIVGM MTIVRFGEQM IVKAMSILVF PFVGVLMLLA
LYLIPQWNGA ALETLSLDTA SATGNGLWMT LWLAIPVMVF SFNHSPIISS FAVAKREEYG
DMAEQKCSKI LAFAHIMMVL TVMFFVFSCV LSLTPADLAA AKEQNISILS YLANHFNAPV
IAWMAPIIAI IAITKSFLGH YLGAREGFNG MVIKSLRGKG KSIEINKLNR ITALFMLVTT
WIVATLNPSI LGMIETLGGP IIAMILFLMP MYAIQKVPAM RKYSGHISNV FVVVMGLIAI
SAIFYSLFS