Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4047 |
Symbol | |
ID | 6970013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3744842 |
End bp | 3746182 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643387809 |
Product | glucarate dehydratase |
Protein accession | YP_002272252 |
Protein GI | 209397778 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTC AATTTACGAC GCCTGTTGTT ACTGAAATGC AGGTCATCCC GGTGGCGGGC CATGACAGTA TGCTGATGAA TCTGAGTGGT GCACACGCAC CGTTCTTCAC GCGTAATATT GTGATTATCA AAGATAATTC TGGTCACACT GGCGTAGGGG AAATTCCCGG CGGCGAGAAA ATCCGTAAAA CGCTGGAAGA TGCAATTCCG CTGGTAGTGG GTAAAACGCT GGGTGAATAC AAAAACGTTC TGACGCTGGT GCGTAATACT TTTGCCGATC GTGATGCCGG CGGGCGCGGT TTGCAGACAT TTGATTTGCG TACCACTATT CATGTAGTTA CCGGGATAGA AGCGGCAATG CTGGATCTGC TGGGGCAGCA TCTGGGGGTT AACGTGGCAT CCCTGCTGGG CGATGGTCAA CAGCGTAGCG AAGTCGAAAT GCTCGGTTAT CTGTTCTTCG TCGGTAATCG CAAAGCCACA CCTCTGCCGT ATCAAAGCCA GCCGGATGAC TCATGCGACT GGTATCGCCT GCGTCATGAA GAAGCGATGA CGCCGGATGC GGTGGTGCGC CTGGCGGAAG CGGCGTATGA AAAATATGGC TTCAACGATT TCAAACTGAA AGGCGGTGTA CTGGCCGGGG AAGAAGAGGC CGAGTCTATT GTGGCACTGG CGCAACGCTT CCCGCAGGCG CGTATTACGC TCGATCCTAA CGGTGCCTGG TCGCTGAACG AAGCGATTAA AATCGGCAAA TACCTGAAAG GTTCGCTGGC TTATGCAGAA GATCCGTGTG GTGCGGAGCA AGGTTTCTCC GGGCGTGAAG TGATGGCAGA GTTCCGTCGC GCGACTGGCC TGCCGACTGC AACCAATATG ATCGCCACCG ACTGGCGGCA GATGGGCCAT ACGCTCTCGT TACAATCCGT TGATATCCCG CTGGCGGATC CGCATTTCTG GACAATGCAA GGTTCGGTAC GTGTGGCGCA AATGTGCCAT GAATTTGGCC TGACCTGGGG TTCACACTCT AACAACCACT TCGATATTTC CCTGGCGATG TTTACCCATG TTGCCGCCGC TGCACCGGGT AAAATTACTG CTATTGATAC GCACTGGATC TGGCAGGAAG GTAATCAGCG CCTGACCAAA GAACCGTTTG AGATCAAAGG CGGGCTGGTA CAGGTGCCAG AAAAACCGGG GCTGGGTGTA GAAATCGATA TGGATCAAGT GATGAAAGCC CATGAGCTGT ATCAGAAACA CGGGCTTGGC GCGCGTGACG ATGCGATGGG AATGCAGTAT CTGATTCCTG GCTGGACGTT CGATAACAAG CGCCCGTGCA TGGTGCGTTA A
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Protein sequence | MSSQFTTPVV TEMQVIPVAG HDSMLMNLSG AHAPFFTRNI VIIKDNSGHT GVGEIPGGEK IRKTLEDAIP LVVGKTLGEY KNVLTLVRNT FADRDAGGRG LQTFDLRTTI HVVTGIEAAM LDLLGQHLGV NVASLLGDGQ QRSEVEMLGY LFFVGNRKAT PLPYQSQPDD SCDWYRLRHE EAMTPDAVVR LAEAAYEKYG FNDFKLKGGV LAGEEEAESI VALAQRFPQA RITLDPNGAW SLNEAIKIGK YLKGSLAYAE DPCGAEQGFS GREVMAEFRR ATGLPTATNM IATDWRQMGH TLSLQSVDIP LADPHFWTMQ GSVRVAQMCH EFGLTWGSHS NNHFDISLAM FTHVAAAAPG KITAIDTHWI WQEGNQRLTK EPFEIKGGLV QVPEKPGLGV EIDMDQVMKA HELYQKHGLG ARDDAMGMQY LIPGWTFDNK RPCMVR
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